Pseudomonas brassicacearum DF41: CD58_11165
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Entry
CD58_11165 CDS
T03174
Name
(GenBank) isocitrate dehydrogenase
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
pbc
Pseudomonas brassicacearum DF41
Pathway
pbc00020
Citrate cycle (TCA cycle)
pbc00480
Glutathione metabolism
pbc00720
Other carbon fixation pathways
pbc01100
Metabolic pathways
pbc01110
Biosynthesis of secondary metabolites
pbc01120
Microbial metabolism in diverse environments
pbc01200
Carbon metabolism
pbc01210
2-Oxocarboxylic acid metabolism
pbc01230
Biosynthesis of amino acids
pbc04146
Peroxisome
Module
pbc_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pbc_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
pbc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
CD58_11165
09102 Energy metabolism
00720 Other carbon fixation pathways
CD58_11165
09106 Metabolism of other amino acids
00480 Glutathione metabolism
CD58_11165
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
CD58_11165
Enzymes [BR:
pbc01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
CD58_11165
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Gene cluster
GFIT
Motif
Pfam:
IDH
CAMP_factor
Motif
Other DBs
NCBI-ProteinID:
AHL33422
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All DBs
Position
complement(2450315..2452540)
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AA seq
741 aa
AA seq
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MPTRSKIIYTFTDEAPALATYSLLPIVEAFTASADIAVETRDISLAGRILASFPEQLGDK
AVADHLAELGDLAVTPEANIIKLPNISASVPQLQAAIKELQAQGYALPDYPETVTSEADK
EAKARYDKIKGSAVNPVLREGNSDRRAPLSVKNYARKHPHKMGAWAADSKSHVAHMSTGD
FYGSEKAALIDAAGSVKIELIAQDGTATVLKEKTTVQAGEILDCAVMSKNALRDFIAAEI
EDAKQKGVLLSVHLKATMMKVSDPIMFGQIVAEFYKEALAKHAQVLEQIGFNLNNGIGDL
YARIKALPAEQQAQIEADIQAVYAARPSLAMVNSDKGITNLHVPSDVIVDASMPAMIRDS
GKMWGTDGQLHDTKAVIPDRCYATIYQAVIEDCKQHGAFDPTTMGSVPNVGLMAKKAEEY
GSHDKTFQIKANGVVRVSDNTGRTLLEQNVEAGDIFRMCQTKDAPIQDWVKLAVNRARAS
STPAIFWLDPMRAHDGVVIEKVQTYLKDYDTAGLDIRIMSPVDAMKFTLARTREGKDTIS
VTGNVLRDYLTDLFPIMELGTSAKMLSIVPLMNGGGLFETGAGGSAPKHVQQLLEENFLR
WDSLGEFLALAASLEHLGVTYNNPKALVLAKTLDQATGEFLDRNKSPSRKVGGIDNRGSH
FYLTLFWAQALAAQNDDAALKAQFASLAKTLTDNEEKIVAELNAVQGKPVDIGGYYFANP
ELTSKAMRPSNTFNAAIAALV
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgcccacccgctcgaagatcatctataccttcaccgacgaagcgcccgccctcgccacc
tattcgctgctgccgattgtcgaagcctttaccgcttcggccgatatcgccgtggaaacc
cgcgatatctccctcgcagggcgcatcctggccagcttccccgagcaactgggtgacaaa
gccgtagccgaccacctcgccgaactgggcgacctggccgttacgcctgaagccaacatc
atcaagctgccgaacatcagcgcctcggtgccgcaactgcaggccgcgatcaaggaattg
caggcccagggctacgcactgccggactaccctgagaccgtgaccagcgaagccgataaa
gaagccaaggcccgttacgacaaaatcaagggcagcgccgttaacccggtcctgcgcgaa
ggcaactccgaccgccgcgcaccgctgtcggtcaagaactacgcacgcaagcacccgcac
aaaatgggcgcctgggccgcggactccaagtcccacgtagcccacatgagcaccggcgat
ttctacggcagcgagaaagccgcgctgatcgacgccgcgggcagcgtgaaaatcgagctg
atcgctcaggatggcaccgccaccgtcctgaaagaaaaaaccaccgtacaagccggtgag
atcctcgactgcgccgtgatgagcaaaaacgccctgcgcgacttcatcgctgccgaaatc
gaagacgccaagcaaaaaggcgtgctgctgtcggttcacctcaaggccaccatgatgaag
gtctccgacccgatcatgttcggccagatcgtcgccgagttctataaagaggccctggcc
aagcacgcacaagtgctcgagcagatcggcttcaacctgaacaacggcatcggcgacctg
tacgcccgcatcaaggccctgccggccgagcagcaggcgcagatcgaagccgacatccag
gcggtctacgcggcgcgtccatccctggcgatggtcaactccgacaaaggcatcaccaac
ctgcacgtaccgagcgacgtgatcgtcgacgcctcgatgccggccatgatccgtgactcc
ggcaaaatgtggggcaccgatggccagctgcacgacaccaaggccgtgatcccggaccgc
tgctacgccaccatctaccaggcggtgatcgaagactgcaagcaacacggcgccttcgac
ccgaccaccatgggcagcgtgccgaacgtcggcctgatggccaagaaagccgaagaatac
ggctcccacgacaagaccttccagatcaaggccaacggcgtggtccgcgtttcggacaac
accggtcgcaccttgctggagcagaacgtcgaagctggcgacatcttccgcatgtgccag
accaaggacgcgccgatccaggattgggtcaagctggccgtcaaccgtgcccgcgccagc
agcaccccggcgattttctggctggatccgatgcgcgcccatgacggcgtggtgatcgag
aaggtccagacttacctgaaggactacgacaccgccggcctggacatccgcatcatgtcg
ccggtcgacgcgatgaagttcaccttggcccgcacccgcgaaggcaaggacaccatttcg
gtgaccggcaacgtcctgcgcgactacctgaccgacctgttcccgatcatggaactgggc
accagcgccaagatgctgtccatcgtgccgctgatgaacggcggcggcctgttcgaaacc
ggcgcgggtggttcggctcccaagcacgtccagcaactgctggaagagaacttcctgcgc
tgggattccctgggcgagttcctggccctggccgcttccctcgaacacctgggcgtgacc
tacaacaacccgaaggcgctggtactggccaagaccctggatcaagccactggcgagttc
ctggaccgtaacaaatcgccttcgcgcaaagtcggcggcatcgacaaccgcggcagccac
ttctacctgaccctgttctgggcccaggcactggccgctcaaaacgacgacgcagccctc
aaggctcagttcgcctccctggccaagacgctgaccgacaacgaagaaaaaatcgttgcc
gaactcaacgccgtccaaggcaagccagtggacatcggcggttactacttcgccaatccg
gagctgaccagcaaggccatgcgcccgagcaacaccttcaacgcggcgattgctgcgctg
gtgtaa
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