Pseudomonas brassicacearum DF41: CD58_12515
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Entry
CD58_12515 CDS
T03174
Name
(GenBank) type VI secretion protein
KO
K11895
type VI secretion system protein ImpH
Organism
pbc
Pseudomonas brassicacearum DF41
Pathway
pbc02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pbc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
CD58_12515
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pbc02044
]
CD58_12515
Secretion system [BR:
pbc02044
]
Type VI secretion system
Imp/Vas secretion system core components
CD58_12515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_TssG
Motif
Other DBs
NCBI-ProteinID:
AHL33668
LinkDB
All DBs
Position
complement(2745859..2746884)
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AA seq
341 aa
AA seq
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MATPSRQTPDALNLSQRLRRDPQRFEWLQALLLLEREHPQAEPLGSGTAPHAEALRLRGP
LTPLFAASEVESLSQEPGSQPVLTTPIFGLGGPDGPLPYAYQEWLQQRARARDHAPAEFL
DLFQHRLLSLLYKVMRKHRIALGFTAPGASAVHAQLRALTGLLPKALQERQAAPDSAVLA
CTALYADGRRSLAGFAAIVREQFGLPVELTAYEGGWRDIPSASRSRLQPGGRNLRLGRSA
VAGTRVWDEHAGVRLTLGPLSAAQANGLLPNGETHPLLASLYALYFGPDLDCTLVLLVRG
AGPLQLGHQAPPRLNWNGGLQRQSNLTVQRIVTRLRQPEIA
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccccaagccggcaaacccctgacgctctgaacctgagtcaacggctgcggcgt
gacccacaacgcttcgaatggctccaggccttattgctgctggaacgcgaacatccccag
gccgaacccttgggcagcggcaccgcgccgcacgccgaagccttgcgcctgcgcgggccg
ttgacgccgctgttcgccgccagtgaagtcgaaagcctgagccaggaacccggttcgcaa
ccggtcctgaccacgccgatctttggcctcggcggccccgacggtcccctaccctacgct
tatcaggagtggctgcaacaacgggcgcgggcgcgggatcatgcgcccgcggaatttctc
gatctgttccagcatcgcttgctcagcctgctctataaggtgatgcgcaagcatcgcatc
gccctgggcttcaccgcgcctggtgcctctgcggtgcacgcgcaattgcgagccctgacc
ggcctgttgcccaaggctttgcaggagcgccaggccgcgcctgattccgccgtgctggcc
tgcaccgcactgtacgccgatggccggcgctccctggccgggtttgcggcgattgtccgc
gagcagttcgggctgccggtggagctgacggcctacgaagggggttggcgggacatcccg
tccgccagccgcagccgcttgcagccgggcggccgcaacctgcgcctgggccgcagcgcc
gtggccggcacccgggtctgggacgaacatgccggtgtgcgcctgacccttggcccgctg
agcgccgcccaggccaatggcttactgcccaacggcgagacccatccgttactcgccagc
ctgtatgccttgtatttcggccccgacctggactgcaccctggtgctactggtccgtggt
gccggccctctgcaactgggccatcaagcgccgccacggttgaactggaacggcggtctg
caacgtcaatccaacctgaccgtgcaacggatcgtcacccgccttcgtcagccggagatc
gcctga
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integrated database retrieval system
