Pseudomonas brassicacearum DF41: CD58_12555
Help
Entry
CD58_12555 CDS
T03174
Name
(GenBank) type VI secretion protein
KO
K11893
type VI secretion system protein ImpJ
Organism
pbc
Pseudomonas brassicacearum DF41
Pathway
pbc02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pbc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
CD58_12555
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pbc02044
]
CD58_12555
Secretion system [BR:
pbc02044
]
Type VI secretion system
Imp/Vas secretion system core components
CD58_12555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_VasE
DUF7019
Motif
Other DBs
NCBI-ProteinID:
AHL33675
LinkDB
All DBs
Position
2752575..2753906
Genome browser
AA seq
443 aa
AA seq
DB search
MSLLPDAVCWHEGMQLLPQHFQLQGLRAEALAAHFAGACNPWFWGVSQLEVDPSALSAGQ
VRLLQLQGTLPDGLPVNLQAGVGPVLELDISEAVNKTDDATVTVYLAISPLWRAGQLLPL
KGRLQSVVGDALPDLTSGEFPESITVWRPNPRLCTQLSKADSICLPLLRIRKEGGGFLRV
PYTPPTPVLLPESMLGRRVAGLCARAREKCLFLAGRLRQAQAAGNQDDAMEIRRQLTALW
SRLPEVEGALNARVATPQALYGLLLGLAGAWSALDPLAGVPAFAPLDFLELQRGYEPLLD
WLEDTLELVRAGYRSLAFERNDQVFSIQLPDDQPNQRLVIGLRMPNGASEQAAAEWLRGA
IIASAPHVALLSRQRMSGLPHQAMSRNEQVAYSVGDDTRLFVVSASGQWFDGQLPLYIVA
PASAQASSPWQVVLFVAQTGESA
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgttacctgacgcggtgtgctggcatgagggcatgcagttactgccccagcat
tttcaattgcaaggcctgcgcgccgaggccctggccgcgcattttgccggggcctgcaat
ccctggttctggggtgtcagtcaactggaagtcgatccctcggccctcagcgccggccag
gttcgactgctgcaactgcaaggcaccttgccggacggcttgccggtcaacctgcaggcc
ggtgtcgggcctgtcctggagctggacatcagcgaggcggtgaacaagaccgacgacgcc
accgtgaccgtgtacctggccatcagtccgctctggcgcgccggacaattgctgccactc
aagggccgcctgcaatcggtggtcggcgatgcgttgccggatctcaccagtggcgaattc
cccgaatccatcaccgtctggcgacccaatccaaggctgtgcacgcaactgagcaaggcc
gactcgatctgcctgccgctgctgcgcattcgcaaggaaggcggcggctttttgcgcgtg
ccctacacgccaccgacgcctgtgttgctgccggagtcgatgctcggtcggcgagtcgcc
ggactgtgcgctcgggcgcgggaaaaatgcctgttccttgccggtcggttgcgccaggcc
caggcggcgggcaaccaggacgatgccatggagatccgtcggcaactgactgcattgtgg
tcacgcttgccggaggtagaaggcgcgctgaacgcccgggtcgcgacaccccaggcgctc
tacggtttgctgctggggctggccggtgcctggtcggccctcgatccgctggccggcgtg
ccggctttcgcgcccctggattttctggagttgcagcgcggctacgaaccgttgctcgac
tggctggaagacaccttggaactggttcgcgccggctatcgcagcctggccttcgagcgc
aatgatcaggtcttctcgatccagttgcccgacgatcagccgaaccaacgcctggtgatc
ggcctgcgcatgcccaacggcgccagcgagcaagcggcggccgagtggttacgcggggca
atcatcgcgtctgcaccgcacgtcgcgctcttgagtcggcagcgcatgagcggtttgccc
catcaggccatgagccgcaacgaacaggtggcctacagtgtgggcgacgacactcgattg
tttgtggtgagcgccagcgggcagtggttcgacgggcagttgccgctgtacatcgtggcg
ccggcgtcggcccaggccagcagcccgtggcaagtggtgttgttcgtggcgcaaaccggt
gaaagtgcctga
DBGET
integrated database retrieval system
