Pseudomonas brassicacearum DF41: CD58_12570
Help
Entry
CD58_12570 CDS
T03174
Name
(GenBank) type VI secretion protein
KO
K11902
type VI secretion system protein ImpA
Organism
pbc
Pseudomonas brassicacearum DF41
Pathway
pbc02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pbc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
CD58_12570
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pbc02044
]
CD58_12570
Secretion system [BR:
pbc02044
]
Type VI secretion system
Imp/Vas secretion system core components
CD58_12570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ImpA_N
Motif
Other DBs
NCBI-ProteinID:
AHL33678
LinkDB
All DBs
Position
2758504..2759586
Genome browser
AA seq
360 aa
AA seq
DB search
MSLSISPLPDRVSQLLEPLSVESPCGQDLRYEPEYDLLRELRREDDTSLPTGVWQSSIKR
GQWPELERLATTLLLERSKDLMISAWLGEAWLHLAGLEGLPGSLALVTGLCERYPEQLHP
QADEGDQSWRVIPLEWLARRYSEVLLTRVPLFDGRDQAFAGFCLDDWQRLQRQQVLGNDS
KNAKASAEAARNDQKKLSELIRTTPLSFWLHRQGSLMLSLQHLQRLDAWSDAYLGNQAPG
YRSLQDVIQALLTLVEEFIAMHPQQPAFIPVPTSPEATTSTSQPQAAPVQVFQEPASREE
AYRQLLVIAGYLARTEPHSPVPYLIRRGVEWGNKPLSELLGELISADAESRRLWTLLGVL
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
gtgagcttgtcgatatcccccttgcccgaccgggtcagccagctgctcgaaccgctcagc
gtcgaatcgccctgcggccaggacctgcgctacgaaccggaatacgatctgctgcgcgag
ttgcgtcgcgaggacgacaccagcctgcccaccggcgtgtggcagtcttcgatcaagcgc
ggccaatggccggagctggaaagactcgccaccacgctgttgctcgagcgcagcaaggac
ttgatgatcagcgcctggctgggggaggcgtggttgcacctggcggggctggaaggctta
ccgggcagcctggccctggtgacgggcctgtgtgaacgctaccccgagcagttgcacccc
caggccgacgaaggtgatcagtcgtggcgggtgatcccgctggagtggctggcccgccgc
tacagcgaagtgttgctgacgcgagtgccgttgttcgatggtcgggaccaggcgttcgcg
ggattttgcctggatgactggcaacgtctgcagcgccagcaagtgctgggcaacgacagc
aagaacgccaaggcctcggccgaagcggcgcgcaacgatcaaaagaaactcagcgagctg
attcgcaccacgccgctgtcgttctggttgcatcgccagggcagcctgatgctgagcttg
cagcatctgcaacggctcgacgcctggagcgacgcttacctgggcaaccaggccccgggc
taccgatccttgcaggacgtgatacaggccttgctgacactggtagaggagttcatcgcg
atgcacccacagcaacccgccttcattccagtgccaacgtctcccgaggctacgacgtcg
acgtctcagccgcaggctgcacctgtccaggtctttcaagaaccggccagccgcgaagaa
gcttatcgacagctgctggtcatcgccggttacctggcccgcaccgaaccccacagcccg
gtgccttacctgatccggcgcggcgtggagtggggcaacaaaccgttgagcgagctgttg
ggcgaactgatcagcgccgatgccgaatcccggcggttgtggacgttgctaggggttctt
taa
DBGET
integrated database retrieval system
