Pseudomonas brassicacearum DF41: CD58_12635
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Entry
CD58_12635 CDS
T03174
Name
(GenBank) XRE family transcriptional regulator
KO
K10778
AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:
2.1.1.63
]
Organism
pbc
Pseudomonas brassicacearum DF41
Brite
KEGG Orthology (KO) [BR:
pbc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pbc03000
]
CD58_12635
03400 DNA repair and recombination proteins [BR:
pbc03400
]
CD58_12635
Enzymes [BR:
pbc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.63 methylated-DNA---[protein]-cysteine S-methyltransferase
CD58_12635
Transcription factors [BR:
pbc03000
]
Prokaryotic type
Helix-turn-helix
AraC family
CD58_12635
DNA repair and recombination proteins [BR:
pbc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
CD58_12635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_binding_1
Ada_Zn_binding
HTH_18
Methyltransf_1N
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
AHL33687
LinkDB
All DBs
Position
complement(2772147..2773229)
Genome browser
AA seq
360 aa
AA seq
DB search
MNRQDSLLPPHAEMVRAMLERDTAYEGVFFTAVKTTGIFCRPGCTARKPKPENVEFFAHA
DEAMSAGYRACLRCKPLDAAAIAPDWIQTLLNAVDAEPDLRWTDALLLEQGIEPLKLRRW
FKQHFGMTFHAYLRTRRLGIALGGIKEGASIDHAAFDSGYESLSGFRDAFVKSFHITPGR
AALSEPLLFTRLTTPLGPMLAMAERRGLVLLEFLDRPALTREIEELQQRYGYTVAPGHNV
HLQQIETELADYFAGKLTAFSVPLHMPGSAFAVRVWAELQNIPYGETRSYGGIATLLGSP
GASRAVGLANGQNRLAIVIPCHRVIGADGSLTGYGGGQPRKAFLLRLEKAAVQVSLPLAF
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgacaagactcgctgctcccgccccatgccgagatggtccgcgccatgctcgaa
cgagacaccgcctacgagggggtgttcttcactgcggtcaagaccactggcatcttctgt
cgtcccggttgcacggcgcgcaagccgaaaccggaaaacgtggagttcttcgcccatgcc
gacgaagccatgtcggccggctaccgggcctgcctgcgctgcaaacccctggacgccgcc
gccatcgcgccggactggatccagaccttgctcaacgccgtggacgccgaacccgatcta
cgctggaccgacgccctgctgctggaacaaggcatcgaaccgctgaaactgcggcgctgg
ttcaagcaacatttcggcatgacctttcacgcgtatttgcgtacccgccgcctgggtatc
gccctgggcggcatcaaggagggcgcctccatcgaccatgcggctttcgattccggctat
gagtcactgagcggttttcgtgacgcgttcgtcaaatccttccatatcacgccgggccgc
gccgccctcagcgaacccttgttgttcacccgcctgaccacgcccttggggccgatgctg
gccatggccgaacggcgtggcctggtgctgctggagttcctcgaccgtccggccctgacc
cgggaaatcgaagagttgcagcagcgctacggctacaccgtcgcgccggggcacaacgtt
catttgcaacagatcgaaaccgagctggccgactatttcgccgggaaactgactgcgttc
agcgtcccgctgcacatgcccggcagcgccttcgccgtacgagtctgggccgagttgcag
aacatcccctatggcgaaacccgcagctacggcggcatcgccaccctgctcggcagcccc
ggcgccagccgcgccgtgggcctggccaatgggcagaatcgcctggccatcgtcattccc
tgccaccgggtgatcggtgcggacggctcgttgaccggttatggtggcggacagccgcgc
aaggcgtttctgttgcggctggaaaaagccgccgtgcaggtttcgctgccgctggcgttt
tga
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