Pseudomonas brassicacearum DF41: CD58_12715
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Entry
CD58_12715 CDS
T03174
Name
(GenBank) lytic transglycosylase
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
pbc
Pseudomonas brassicacearum DF41
Brite
KEGG Orthology (KO) [BR:
pbc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pbc01011
]
CD58_12715
Enzymes [BR:
pbc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
CD58_12715
Peptidoglycan biosynthesis and degradation proteins [BR:
pbc01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
CD58_12715
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
LPAM_MltD
LysM_RLK
LysM3_LYK4_5
LysM2_CERK1_LYK3_4_5
LysM_OapA
Motif
Other DBs
NCBI-ProteinID:
AHL33701
LinkDB
All DBs
Position
complement(2789325..2790773)
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AA seq
482 aa
AA seq
DB search
MSSSIRRSVQSDTLTRLAQAIAVAVSATLAGCQSTGQVPQSDAAHTPNIAARAKQKPIWL
TEKPTPQVPQDVWERMRQGFQLQETAGVNPRIEQQRLWFASNPSFLENAGERGSLYIHYI
VERLEERNMPLELALLPVIESAYNPMAYSRANAVGLWQFIPSTGRYFNLRQTRFYDGRRD
ITASTTAAMDYLTRLHDMFNGDWLLALAAYNAGEGTVSRAIERNEKLGLPTDYWNLPLPS
ETQAYVPKLLALSQVVLSPDAYGVNLNPIANEPYFQVVEINQRMDLSKVAAVANIDEDEL
FQLNPAFKQRTTIDGPQHLLVPTSKAQLLTASLSTMRPEELISQRSLKPVFESVDDSDVE
GARRNYRVKRGDNLAQIAKANNVQTKDLQRWNKLSGNKLKVGQTLVMQDTKATKATGKRI
STVVAANSKDQKKQTQYKVKQGDSLYVVAKRFNVEMQHLKRWNPRMGKALKPGQMLTVYS
PH
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcatctatacgaaggtccgtccagtcagacacattgacccgcttggctcaagcc
attgcggtggctgtgtccgccaccctggcgggctgccagagcacgggccaggttccgcaa
agcgacgcggcccacacgccgaatatcgccgctcgcgccaagcaaaaacctatctggctc
actgaaaaacctacccctcaagtgccccaggacgtctgggaacgcatgcgccagggcttc
cagttgcaggaaaccgccggcgtcaatccacgtatcgagcaacagcgcctgtggttcgcc
agtaacccgtccttcctggaaaacgccggtgagcgcggcagcctgtacatccattacatc
gtcgaacgcctcgaagaacgcaacatgccgttggaactggcgctgctgccggtgatcgag
agcgcctacaacccgatggcctattcccgggccaatgcggtggggctgtggcaattcatc
ccgtccacggggcgttacttcaacctgcgccagacccgcttctatgacgggcgtcgcgat
atcaccgcgtccaccacggccgcgatggactacctgacgcgcctgcacgacatgttcaac
ggcgactggctgctggcgttggcggcgtacaacgcaggcgaaggcacggtcagccgcgcc
atcgagcgcaacgaaaagcttggcctgcccactgattactggaacctgccgctgcccagc
gaaacccaggcctacgtgccgaagctgctggccttgtcccaggtggtgctctcccccgat
gcctatggcgtgaacctcaacccgatcgccaacgaaccctatttccaggtcgtcgaaatc
aaccagcgcatggacctttccaaggtcgcggcggtggccaacatcgacgaagacgaactg
ttccagctcaacccggccttcaagcaacgcaccaccatcgacggtccgcaacacctgctg
gtgcccacgtccaaggcccagttgctgaccgccagcctgtcgaccatgcgtccggaagag
ttgatcagccagcgctcgctcaagccggtgttcgagagcgtcgatgacagcgacgtggaa
ggcgccaggcgcaactaccgcgtcaagcgcggcgacaacctggcccagatcgccaaggcc
aacaatgtccagaccaaggacctgcaacgttggaacaagctcagcggcaataaactcaag
gtcggccaaaccctggtgatgcaggacaccaaagccaccaaggccaccggcaagcgcatc
agcaccgtggtcgccgccaacagcaaggatcaaaagaagcagacccaatacaaggtcaag
cagggtgactcgttgtacgtagtggccaagcgcttcaacgtcgaaatgcagcacctcaag
cgctggaatccacggatgggcaaggcgctcaagcctgggcagatgctgacggtttactcc
ccccactaa
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