Pseudomonas brassicacearum DF41: CD58_12880
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Entry
CD58_12880 CDS
T03174
Name
(GenBank) nuclease SbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pbc
Pseudomonas brassicacearum DF41
Brite
KEGG Orthology (KO) [BR:
pbc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbc03400
]
CD58_12880
DNA repair and recombination proteins [BR:
pbc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CD58_12880
Archaeal homologous recombinant proteins
CD58_12880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
ABC_tran
MMR_HSR1
cobW
AAA_22
RsgA_GTPase
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AHL33731
UniProt:
W8PVK4
LinkDB
All DBs
Position
complement(2832163..2835804)
Genome browser
AA seq
1213 aa
AA seq
DB search
MKILAIRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAVPR
LNNTGRDAKVPDADGDIATGDPRTLLRRGTGDGYAEVDFRGIDGRRYRARWEANRAREKA
GGKLQASRQSLRDLDNDQLLASQKGEYKIQLEAALGLNFEQFTRAVLLAQSEFSAFLKAD
DNERSELLEKLTDTALYTRLGRRAFDKAKHAKETHKQLQDQATGVTPLAPEARAELDQRF
NEAQQQLKTQQAQLKQLEQQHTWLKDLRQLQDEQSSAAEQLQQAQADWNTLADERLKLTR
LEQLAPQRHQFIRQTELNRQLEPLAAQIQQLTQQQIDLHAQQAELEKALEDAHQALTSAR
QQSTDSAPLLRQAFDEQSTLARLAQDASLSAERQEQAQQACSEGQRTIDTLLEQQKQVAE
RLQRIAGELEQSSHLAPLSDAWNAYRDRLQQLMLIGNRLNQGQAELATLEHSAARAAEDL
ATRRQDLEVLYKEAGAEPEAVAEQIQLLGNLLQDNRKQLRAFEELTRLWASQQELDKRGA
ELEQRQQLALQERDRLVREGGEAKAELTIAEQTLSVTRELLERQRLARSESVEQLRAQLQ
DEQPCPVCGSVEHPYHQPEALLQSLGRHDENEEANARKAVERLNEKVIDLRAQYSGVIAQ
LKELKQQQEQLASQQQSLTPSLEAHPLSAQLLAQDSNKRDTWLAQQNSQLHQHISQDEQR
QTALLTLQQDAARLAQQLRDAETASQQAAQQLSNQQQELARDRQRLDDELSHFSALLPAD
TLQALRTEPAATFMQLDQQIAQRLEQSEQQRDELSEQLQRQQTLEKEQDRQQTRVQQLEA
ARQQFNALTKQQQACQQTLTQRLGAHSSAEQWQQQLDQALEQARHAEATANQQLQELRNN
LVQRAAELKARQEQSQSLNAEHQTLAAGIAQWRASHPELDDAALETLLSLDEQHVSQLRQ
RLLNSEKAIEQARVLLTEREQRLQNHQAQHNGNLLPEQLAEALTELQAQFAASEQRCAEL
RAEQAEDQRRQNANQALAQQIEQAYVEYQRWARLDALIGSATGDRFRKLAQAYNLDLLVH
HANVQLRQLVRRYRLKRGGSMLGLLVMDTEMGDELRSVHSLSGGETFLVSLALALGLASM
ASSTLKIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVAVISHVQEMHERIPVQIQV
HRQGNGLSTVEVK
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgaagattctcgcgatccgcctcaaaaacctcgcctccctggccgggcctttcgagatc
gatttcaccgccgaacccttggccagcgccggcctgttcgccatcaccggccccacgggc
gccggcaagagcacactgctcgatgccttgtgcctggcgctgttcggcgccgtgccgcgc
ctcaacaacaccgggcgtgacgccaaggtgccagacgccgacggcgacattgccacgggc
gatccgcgcacgttgttgcgccggggtacgggcgacggttatgccgaagtggattttcgc
ggcatcgacgggcgccgctatcgggcccgctgggaagccaatcgtgcccgggaaaaggcc
ggcggcaagttgcaggccagccgccagagcctgcgggacctggacaacgatcaactgctg
gcgagccagaaaggcgaatacaagatccaactcgaggcggcccttggcctgaatttcgag
cagttcacccgcgccgtactgctggcccagagcgagttcagtgcgttcctcaaggccgat
gacaacgagcgcagcgaactgctggaaaaactcaccgacaccgccctctacacccgcctc
gggcgccgcgccttcgacaaggccaagcacgccaaggaaacccacaaacagttgcaggac
caggccaccggcgtcacgccgctcgctcccgaggcccgggccgagctggaccagcgcttc
aacgaagcccagcagcaactcaagacccaacaggcccaactcaagcagttggaacagcaa
cacacctggctcaaggacctgcgccagttgcaggacgaacagagcagcgccgccgagcaa
ctgcaacaggcccaagccgattggaatacgctggcagacgaacgcctgaaactgacgcgc
ctggaacaactggcgccccagcggcatcagttcattcgccagacggaactgaaccggcag
ctcgaacccctggcggcgcagatccagcagctcacccagcagcagatcgacctgcatgcc
caacaagccgaactggaaaaggccctcgaggacgcgcatcaggcgctgaccagcgcccgc
cagcaaagcactgacagtgcaccattgctgcgccaggccttcgacgaacagagcaccctc
gcccgcctggcccaggacgcgagcctcagcgccgaacgccaggaacaggcgcaacaggcc
tgtagcgaaggccagcgcacgatcgacaccttgcttgaacagcaaaagcaagtggccgaa
cgtttgcagcgtatcgctggcgagcttgaacaaagcagccaccttgcgccgctgagcgat
gcctggaacgcctatcgcgatcgactccagcagttgatgttgattggcaatcgcctgaac
cagggccaggcggaactcgccacactggagcacagcgccgcgcgcgccgccgaggacctg
gcgacccgtcggcaagacctcgaagtcctctacaaagaagccggcgccgaaccggaagcg
gtggccgaacagatccagttgctcggcaacctgctgcaagacaaccgcaagcaactgcga
gcgttcgaagagctgacccggctctgggccagccagcaagaactggacaaacgcggcgcc
gagcttgagcaacgccagcagttggcattgcaggaacgcgaccggttggtacgtgaaggc
ggtgaagcgaaggccgaactgacgatcgccgaacagaccctgagcgtcacccgtgaactg
ctggagcgccagcgcctggcccgcagcgaaagcgtcgagcaactgcgcgcgcagttgcag
gacgagcagccctgcccggtgtgtggcagtgtcgaacatccttatcatcagcccgaagcg
ctgctgcaaagcctcgggcgtcacgatgaaaacgaagaggccaacgcccgcaaagcggtc
gagcggctcaatgaaaaagtcatcgacctgcgcgcgcaatacagcggcgtcatcgcccag
ctcaaggaactcaaacagcaacaagaacagctcgccagccagcagcagagcctgaccccc
agcctggaagcccacccgctgtcggcgcagttgctggcccaggattcgaacaagcgtgac
acttggctggcccagcagaacagtcagctgcatcagcacatcagccaggacgaacaacga
caaaccgccctgctgaccctgcaacaggatgccgcgcgcctcgcccaacaactgcgcgat
gccgaaacggcaagccagcaggcggcacagcagttgagcaaccagcaacaggagctggcc
cgtgatcgccagcgcctggacgatgagctgagccacttcagcgccctgttgccggccgac
accttgcaggccctgcgtactgaaccggccgccaccttcatgcagctcgaccagcagatt
gcccagcgcctggaacaatcggaacagcagcgcgacgaactcagcgaacaactccagcgc
cagcaaaccctggagaaagagcaggaccgccagcagactcgcgtgcagcaattagaagcg
gcgcgtcagcaattcaacgccctgaccaagcaacagcaggcctgccaacaaacactcacg
caacggctgggcgcacactccagcgccgaacagtggcagcaacaacttgaccaggccctc
gaacaggctcgccatgccgaggcgacagccaatcaacaactgcaggagttgcgtaacaac
ctggtgcaacgggccgccgaactcaaagcccggcaggaacagtcccaatcgctgaatgca
gaacatcagacgctggccgccggcatcgcacaatggcgcgcctcccatccagagctggac
gacgctgcgcttgagaccttgctcagcctggatgagcagcacgtcagccaattgcgccag
cgcctgctcaacagcgaaaaagccatcgagcaggcccgcgtgctgctgaccgaacgcgag
cagcgtctgcaaaaccaccaggcccagcacaacggcaacttgctgccggagcaattggcc
gaagccctcaccgagctgcaagcccaattcgccgccagcgaacagcgttgcgccgaactg
cgcgccgaacaggccgaggatcagcgccggcagaacgccaaccaggccctggcccagcag
atcgaacaggcctatgtcgaataccagcgttgggcgcgactggatgcgctgatcggttcg
gccaccggcgaccgtttccgcaagctggcccaggcctacaacctcgacttgctggtgcac
cacgccaacgtccagcttcggcagctggttcgccgttaccgactcaagcgcggcggcagc
atgctcgggcttttggtgatggacacggagatgggcgatgaactgcgctcggtgcattcg
ttgtccggcggcgaaaccttcctggtctccctcgccttggcgctgggcctggcctcgatg
gcgtccagcacgctgaaaatcgagtcgctgttcatcgacgaagggtttggcagcctcgac
cccgaatccctgcaactggcgatggacgcccttgatgggttgcaggcccagggccgcaag
gtcgcggtgatttcccacgtgcaggaaatgcacgagcggatcccggtgcagatccaggtc
catcgccagggcaacgggttgagcaccgtggaggtgaaatga
DBGET
integrated database retrieval system
