Pseudomonas brassicacearum DF41: CD58_12885
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Entry
CD58_12885 CDS
T03174
Name
(GenBank) exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pbc
Pseudomonas brassicacearum DF41
Brite
KEGG Orthology (KO) [BR:
pbc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbc03400
]
CD58_12885
DNA repair and recombination proteins [BR:
pbc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CD58_12885
Archaeal homologous recombinant proteins
CD58_12885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
AHL33732
LinkDB
All DBs
Position
complement(2835801..2837045)
Genome browser
AA seq
414 aa
AA seq
DB search
MRLFHTSDWHLGQNLHGQERDFEHACFLDWLLRQLTSEKPDVLLIAGDIFDTVNPPVKAQ
ERLYDFIVSAHEQNANLTIVMIAGNHDSGSRIELPAPLMRRLRTHALGRVLWLDDGQLDV
ERLLLPLPDAKGKVKAWCLALPFLRPAEVTGAQLGDDYLRGIGQVHEWLIAAANGKRKKG
QALIAVSHAHMAGGSVSEDSERSLIIGNAEALPASLFGPSISYVALGHLHKPQKVNGEER
IRYSGSPIPLSFSEIGYQHQILDITLDGETLVKVEPRLIPRAVNLQRLGPAPLAEILVQL
KDLPDIDLLADVQRQPWLEVRVRLDEPQPDLRHQVETALQGKAVRLVRIAAEYAGNGANG
SADDGAALIELDQLSPQELFSRAWQDTYGNDVDEQTLKDFAVLLQDVQMESEQP
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
ttgcgtctgtttcacacctccgactggcacctggggcaaaacctccacggccaggaacgc
gacttcgaacacgcttgtttcctcgactggctactgcgccagctgaccagcgaaaaaccc
gatgtgctgctgatcgccggcgatatcttcgacaccgtgaacccgccggtcaaagcccag
gagcgactgtacgacttcatcgtcagcgcccatgaacaaaatgccaacctgaccatcgtg
atgatcgccggcaaccacgattccggctcgcggatcgagctgccggcgcccttgatgcga
cgcttgcgcacccatgccctgggccgggtgttgtggctggacgacggccaattggacgtc
gagcgcctgctgctgccgttgcccgacgccaagggcaaggtcaaggcgtggtgcctggcc
ctgccgttcctgcgacccgccgaagtcaccggcgcgcagttgggcgacgactacttgcgg
ggcattggccaggtccatgaatggctgatcgccgccgccaacggcaagcgcaagaaaggc
caggcgctgatcgccgtcagccatgcgcacatggccggcggctcggtgtccgaggattcc
gaacgcagcctgatcatcggtaacgccgaagcgctgcccgccagcctgttcggcccaagc
atcagctacgtcgccctcggccacttgcacaagccgcagaaggtcaacggtgaagagcgc
atccgctacagcggctcgccgatcccactgtcgttctcggagattggctatcagcaccag
attctcgacatcaccctggacggcgaaaccctggtcaaggtcgagccacggctgattccc
cgcgccgtcaacctgcaacgcctgggcccggcaccgctggccgagatcctggtgcaactc
aaggacctgcccgacatcgacctgttggccgatgtccagcgtcagccctggctggaagtc
cgggtgcgcctcgacgagccgcagccagacctgcgtcatcaggttgaaaccgcgctgcaa
ggcaaagccgtgcgcctggtgcggatcgccgccgagtacgccggcaacggtgccaacggc
agcgccgatgacggcgccgcgctgatcgagctggaccaactcagcccacaggaactgttc
agccgcgcctggcaggacacctacggcaatgacgtggacgaacagaccctcaaggatttt
gccgtgctgttgcaagacgtgcagatggagagcgagcaaccatga
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