Pseudomonas brassicacearum DF41: CD58_12975
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Entry
CD58_12975 CDS
T03174
Name
(GenBank) DNA-binding protein
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
pbc
Pseudomonas brassicacearum DF41
Brite
KEGG Orthology (KO) [BR:
pbc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pbc03000
]
CD58_12975
Transcription factors [BR:
pbc03000
]
Prokaryotic type
Helix-turn-helix
GntR family
CD58_12975
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
HTH_Crp_2
HTH_11
Motif
Other DBs
NCBI-ProteinID:
AHL33750
LinkDB
All DBs
Position
complement(2860229..2861662)
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AA seq
477 aa
AA seq
DB search
MELHVVINGRKDLAGQLYQQLRSAIESGRLAAGTQLPPSRLLAEQLGVSRKTVSDTYAQL
TYENFLTGIIGKGTYVNARPARIVRKQSHRELAGADVVEAWRTMPDLMRHPTLEGALRYD
FIGGATGKGQFPLDDWRRCTAHALRQIASAKGFYSQPEGLPSLRNAIARHIAFSRGVNCQ
DEDVVVCNGAQQALDLISRVLTRPGSLVAMEDPGYPPARLLFGSQGATVAGVPVDEQGMR
VDLIPDGTRLIYVTPSHQFPLGMPMSQARREALLARAYELGAIIIEDDYDSEFRYEGRPA
DSLQSMDERGIVAYVGTFSKTLLPELRLGYAILPPAILEAVILAKRLTDQHTSTLPQWAL
AKFIAEGCLLKHIRRCHTLYAGRRERILARMAGDLSPWFEAVPTTAGFHMAVLCKVPIDL
ALVIDLAKKAEVGLYSLEGFFNEASVRAGLFFGFGSIETLDIDIALDRLRDILQQVA
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggaacttcatgttgtcatcaacggccgcaaggacctggcgggccagctgtatcaacaa
ttgcgcagcgccatcgaaagcgggcgcctggccgccggtacgcaactgccgcccagccgc
ttgctcgccgaacaactgggggtttcgcgcaagaccgtttccgacacctacgcccaactg
acctacgaaaacttcctcaccggcatcatcggcaaaggcacctacgtcaacgcgcggcca
gccaggatcgtgcgcaaacaaagccaccgcgaactggccggtgccgacgtcgtcgaggcc
tggcgcaccatgccggacctgatgcgccatcccaccctcgagggcgcgttgcgttatgac
ttcatcggcggcgccaccggcaagggccagtttcccctggacgactggcggcgctgcacc
gcccatgccctgcgccagatcgccagcgccaagggcttctacagtcaacccgaaggcttg
ccgtcgctgcgcaatgccattgcccggcacatcgcgttttcccgcggggtcaattgccag
gatgaagacgtggtggtgtgcaacggcgcgcagcaggccctggacctgatctcgcgggta
ttgacccggcccggcagcctggtggcgatggaagatccggggtatccgccggcgcggctg
ctgttcggctcccagggcgccacggtggccggcgtgccggtggacgagcaaggcatgcgc
gtggacctgattcccgatggcacgcgcctgatttatgtgacgccttcccaccagttcccc
ctgggcatgcccatgagccaggcccgccgcgaggccttgctggcgcgggcctatgagcta
ggggcgatcatcatcgaggacgattacgacagcgagttccgctacgaaggtcgccctgcc
gattcgctgcagagcatggacgaacgggggatcgtggcgtacgtcggcaccttctccaag
accctgttgccagagctgcggctcggctacgccatcctgccgccggcgatcctcgaagcg
gtgatcctggccaaacgcctcaccgaccagcacacctccaccctgccccagtgggcgctg
gccaagttcatcgccgagggctgcctgctcaagcacatccgtcgctgccacaccctgtat
gccgggcggcgcgagcgaatcctggcccgcatggccggggacctgtcaccctggttcgaa
gccgtgcccaccaccgccggcttccacatggcggtactgtgcaaggtacccatcgacctg
gcgctggtgatcgatctggcgaaaaaggccgaagtcgggctgtacagccttgaaggtttt
ttcaacgaggcgtcggtgcgagcgggtctgttcttcggtttcgggtccatcgaaaccctg
gacatcgacatcgccctcgaccgcctgcgggacattttgcagcaggtcgcctga
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