Pseudomonas brassicacearum DF41: CD58_13300
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Entry
CD58_13300 CDS
T03174
Name
(GenBank) spermidine/putrescine ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
pbc
Pseudomonas brassicacearum DF41
Pathway
pbc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pbc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CD58_13300
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pbc02000
]
CD58_13300
Transporters [BR:
pbc02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
CD58_13300
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
AHL33812
LinkDB
All DBs
Position
2924926..2925966
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AA seq
346 aa
AA seq
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MSRSLRCNIACALALLSTSVVAAPQSLTVISFGGATKQAQDKAYFQPFNASGAGSIVAGE
YNGELSKIKAMVAAGHTSWDVVEVESPELLRGCEEGLFEKLDLGRMGDPTNYVPGALNEC
GVATYVWSMVLAYDQSKLAKAPKSWADFWNVAEYPGKRGLRKGAKYTLEIALLADGVKAQ
DLYKVLNTPEGVSRAFAKLDQIKANIQWWEAGAQPAQWLVAGDVAMSAAYNGRIASAQKE
GMKLSIVWPQSLYDPEYWAVVKGTPNKALAEQFIAFASQPQTQKVFSENIPYGPVHRQTL
ALLPAAVQAQLPTAEANLAEAQAVDAEFWVDHGEELEQRFNAWAAR
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgtccagatccttgcgttgcaatattgcgtgtgccctggcgttgttgagtaccagtgtt
gtagccgcgccacaaagcctgaccgtgatttctttcggcggcgctaccaagcaggcccag
gacaaggcctacttccaacctttcaacgccagtggtgcaggaagcatcgtggccggcgaa
tacaacggtgaactgtcgaagatcaaggccatggttgcagccgggcataccagctgggac
gtggtcgaagtggaaagccccgagctgttgcgtggctgtgaggaaggcctgttcgagaag
ctcgacctggggcggatgggcgatccgacgaattatgtgccgggggccctcaatgaatgc
ggtgtcgccacctatgtctggtcgatggtcctggcctacgaccagagcaagctcgccaag
gcgcccaagtcctgggcggatttctggaacgttgccgagtacccgggcaagcgcggcctg
cgcaagggcgccaagtacaccttggaaatcgcgttgctggccgatggggtcaaggcgcaa
gacttgtacaaggtgttgaacacgccggaaggtgtgtcccgggccttcgccaaactcgac
cagatcaaggcgaatatccagtggtgggaggccggcgcgcaaccggcgcagtggttggtg
gcaggggatgtggcgatgagcgccgcctacaacggccgcatcgcttcggcgcaaaaggaa
ggcatgaagctgagcatcgtctggccgcagagcctgtacgatccggagtactgggcggtg
gtcaagggcacgccaaacaaggccctggctgaacagttcattgctttcgccagccagcca
cagacccagaaggtgttctcggaaaacatcccttacggaccggtgcatcgccagaccctg
gccctgctgcctgcggcggtgcaggcgcagttgcccaccgccgaggccaatctggctgaa
gcccaggcggtggatgccgagttctgggtcgaccatggcgaggagctggagcaacgtttc
aacgcctgggcggctcgctag
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