KEGG   Pseudomonas brassicacearum DF41: CD58_13655
Entry
CD58_13655        CDS       T03174                                 
Name
(GenBank) DNA repair protein
  KO
K10979  DNA end-binding protein Ku
Organism
pbc  Pseudomonas brassicacearum DF41
Pathway
pbc03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:pbc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    CD58_13655
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pbc03400]
    CD58_13655
DNA repair and recombination proteins [BR:pbc03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     CD58_13655
SSDB
Motif
Pfam: Ku
Other DBs
NCBI-ProteinID: AHL33879
LinkDB
Position
complement(3010315..3011205)
AA seq 296 aa
MARAIWKGAISFGLVHIPVALVSATSSQGVDFDWLDKRSMDPVGYKRVNKVTGKEVTKED
IVKGVQYQKGQYVLLSEEEIRSAHPKSTQTIDIFSFVDSEKIPLQNIDTPYFLAPDKRGG
KVYALLRETLVKTNKVALAHVVLHTRQHLAALMPLESALVLVMLRWPAEVRDLDILELGD
EVTHPTLAKGELDMAKRLVQDMSADWEPEQYRDSFEDKIMELVEKKANEGRLEAVETDPG
EEQRKTADVIDLTELLKRSLGGKGKAADKPAAKTAAKPTKTGKSTPAKKATKASRG
NT seq 891 nt   +upstreamnt  +downstreamnt
atggcacgggcaatctggaaaggcgcaatcagtttcggactggtccacattcctgtggcg
ctggtgtcggccacctcgtcccagggtgtggatttcgattggttggacaagcgcagcatg
gacccggtgggctacaagcgggtcaacaaagtcacgggcaaggaagtgaccaaggaagac
atcgtcaaaggcgtgcaatatcaaaaaggccagtatgtgctgctcagcgaagaggaaatc
cgctccgcccaccccaaatccacccagaccatcgatattttttccttcgtcgacagcgaa
aaaatcccgctgcaaaacatcgacaccccgtacttcctggcgccggacaagcgcggcggc
aaagtctacgcgctgttgcgtgaaaccctggtcaagaccaacaaagtggccctggcccac
gtcgtgctccacacccgccagcacctggcggccctcatgcccctggaatcggccctggtg
ctggtgatgctgcgctggccggcggaagtgcgtgacctcgacatcctggaactgggcgac
gaggtcactcatccaaccctggccaagggtgagttggacatggccaagcgcctggtgcag
gacatgagcgccgactgggagccggaacaataccgcgacagtttcgaagacaaaatcatg
gaactggtggagaagaaggccaacgaaggccgactcgaagcggtggaaaccgacccgggc
gaagagcaacgcaagaccgccgatgtcatcgacctcaccgaactgctcaagcgcagcctg
ggtggcaaaggcaaggcggcggacaagcccgccgcaaaaaccgctgcaaaaccgacgaag
accggcaagtccactcctgctaaaaaagccaccaaggcttctcggggctag

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