Pseudomonas brassicacearum DF41: CD58_13655
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Entry
CD58_13655 CDS
T03174
Name
(GenBank) DNA repair protein
KO
K10979
DNA end-binding protein Ku
Organism
pbc
Pseudomonas brassicacearum DF41
Pathway
pbc03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pbc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
CD58_13655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbc03400
]
CD58_13655
DNA repair and recombination proteins [BR:
pbc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
CD58_13655
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
AHL33879
LinkDB
All DBs
Position
complement(3010315..3011205)
Genome browser
AA seq
296 aa
AA seq
DB search
MARAIWKGAISFGLVHIPVALVSATSSQGVDFDWLDKRSMDPVGYKRVNKVTGKEVTKED
IVKGVQYQKGQYVLLSEEEIRSAHPKSTQTIDIFSFVDSEKIPLQNIDTPYFLAPDKRGG
KVYALLRETLVKTNKVALAHVVLHTRQHLAALMPLESALVLVMLRWPAEVRDLDILELGD
EVTHPTLAKGELDMAKRLVQDMSADWEPEQYRDSFEDKIMELVEKKANEGRLEAVETDPG
EEQRKTADVIDLTELLKRSLGGKGKAADKPAAKTAAKPTKTGKSTPAKKATKASRG
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atggcacgggcaatctggaaaggcgcaatcagtttcggactggtccacattcctgtggcg
ctggtgtcggccacctcgtcccagggtgtggatttcgattggttggacaagcgcagcatg
gacccggtgggctacaagcgggtcaacaaagtcacgggcaaggaagtgaccaaggaagac
atcgtcaaaggcgtgcaatatcaaaaaggccagtatgtgctgctcagcgaagaggaaatc
cgctccgcccaccccaaatccacccagaccatcgatattttttccttcgtcgacagcgaa
aaaatcccgctgcaaaacatcgacaccccgtacttcctggcgccggacaagcgcggcggc
aaagtctacgcgctgttgcgtgaaaccctggtcaagaccaacaaagtggccctggcccac
gtcgtgctccacacccgccagcacctggcggccctcatgcccctggaatcggccctggtg
ctggtgatgctgcgctggccggcggaagtgcgtgacctcgacatcctggaactgggcgac
gaggtcactcatccaaccctggccaagggtgagttggacatggccaagcgcctggtgcag
gacatgagcgccgactgggagccggaacaataccgcgacagtttcgaagacaaaatcatg
gaactggtggagaagaaggccaacgaaggccgactcgaagcggtggaaaccgacccgggc
gaagagcaacgcaagaccgccgatgtcatcgacctcaccgaactgctcaagcgcagcctg
ggtggcaaaggcaaggcggcggacaagcccgccgcaaaaaccgctgcaaaaccgacgaag
accggcaagtccactcctgctaaaaaagccaccaaggcttctcggggctag
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