Pseudomonas brassicacearum DF41: CD58_14495
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Entry
CD58_14495 CDS
T03174
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pbc
Pseudomonas brassicacearum DF41
Pathway
pbc00300
Lysine biosynthesis
pbc00470
D-Amino acid metabolism
pbc01100
Metabolic pathways
pbc01110
Biosynthesis of secondary metabolites
pbc01120
Microbial metabolism in diverse environments
pbc01230
Biosynthesis of amino acids
Module
pbc_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pbc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CD58_14495
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CD58_14495
Enzymes [BR:
pbc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
CD58_14495
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AHL34043
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All DBs
Position
3205491..3206702
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AA seq
403 aa
AA seq
DB search
MPNLPETVMAAIDGARRHSEDPLALFVYDLDALTRHVGEVMAALPAGVELYYAIKANSEA
PMLEALAPLVSGFEISSGGEIDRVVACPTRKPYVFSGPGKLDSDLRAALAHQVEAIHLES
LSEIDRLQRLAQQAGRVQPVFIRINPQLPSTLSSKLAMAGTATPFGIDESELPEAVRRVQ
AFSHLTLKGFHVHAMSHQNSVERHEQLLDFYLQRWAEWKALATGTEQPTHLNVGGGIGVD
YLTGQRFDWQRLCRHLGQSLAAHEQPPVVRFEPGRFISAFCGYYVIEVLDAKTSHGEHFL
VCRGGTHQFRLPAAQSHDHPVIHLPRRRKPQPDTAKTWTVVGQLCTPKDVLSRGCQLQGV
EVGDLLVLPMAGAYGYNISHADFLCHPRPLQHFVSATAPGALL
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgcctaacctgcccgaaaccgtgatggctgccatcgacggcgcgcgccgtcatagcgaa
gatccgctggcgctgttcgtctacgacctggacgcactgacccggcacgtcggcgaggtc
atggccgcgctgcccgcgggtgtggagttgtattacgcgatcaaggccaacagtgaagcg
ccgatgctcgaggcgctggcgccgctggtcagtggattcgagatttcctccggcggcgaa
atcgaccgggtcgtggcctgtcctacgcgtaaaccctacgtgttttccggtccgggcaag
ctcgattccgacctgcgcgccgccctggcgcatcaggtggaggccattcacctggaaagc
cttagtgagatcgaccgcttgcagcgcctggcgcaacaggccggccgcgtccaaccggtc
ttcatccgcatcaacccccaattgccatccaccttgtccagcaaactggcgatggccggc
acggcgacgccgttcggcattgacgagtcggagttgcccgaagcggttcggcgggtgcag
gcgttcagtcacttgaccctcaagggctttcatgtgcacgcgatgtcccaccagaactcg
gtggagcggcacgaacaactgctggatttctacctgcaacgctgggccgagtggaaggca
ctggcgaccgggaccgagcaaccgacgcacttgaatgtcggcggcggcatcggtgtcgac
tacctcaccgggcaacggtttgactggcagcgtttgtgccggcacctgggccaatccctg
gccgcccatgaacaaccgccagtggtgcgtttcgagccggggcgtttcatcagtgcgttc
tgtggctactacgtgatcgaagtgctggacgccaagaccagccacggcgagcacttcctg
gtctgccggggcggtacccaccagttccgcctgccggcggcccagagtcacgatcatcca
gtcattcatctgccgcgccgacgcaagccgcagccggacaccgcgaaaacctggaccgtc
gtcggccagctgtgcacacccaaggatgtgttgagccgtggttgccaattgcaaggcgtc
gaggtgggcgacctgttggtgctgccgatggccggcgcctatggctacaacatctcccac
gccgactttctgtgtcatccgcggccgctgcagcactttgtcagcgccacggcgcccggt
gctttgttgtga
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