Pseudomonas brassicacearum DF41: CD58_14670
Help
Entry
CD58_14670 CDS
T03174
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pbc
Pseudomonas brassicacearum DF41
Pathway
pbc00300
Lysine biosynthesis
pbc00470
D-Amino acid metabolism
pbc01100
Metabolic pathways
pbc01110
Biosynthesis of secondary metabolites
pbc01120
Microbial metabolism in diverse environments
pbc01230
Biosynthesis of amino acids
Module
pbc_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pbc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CD58_14670
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CD58_14670
Enzymes [BR:
pbc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
CD58_14670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AHL34078
LinkDB
All DBs
Position
3243305..3244615
Genome browser
AA seq
436 aa
AA seq
DB search
MSALAPDSQYIHTDKIEGVSYHLLADKVPTPFYAYSATQIKADFAELKRTLPQGIDYFYS
LKANPNKTLIALLHQAGTGCEVCSLVELEIALRQGVAPGDIIFVGPGKHINELTQCCLAG
IKAVVVESIEEMHLLNDIAAGLGVVQNIALRINPDFTGEKAKLVMSGKPRQFGIDEQLLP
QAFAVLGQLVQLRLAGIHIYLGTRILDWQALANNTQNILALAATLQQDYEIDLDFVDVGG
GFGVRYFDKEKALDLAALGEALLPVVNDYCQRFPRCKIVIELGRFLVARAGIFVTRVNYL
KPSRDEWFAVCDGGANCHGSAAGINSLIRRNFPMARLGPPRRNDDQHRYQVTGPLCTPTD
LLGENVMLAELRSGDLIGIGHSGAYGASASPVSFLSFGHPAEVLVENDQAFLIRTADSVD
TLLAPQVYQCLSLAHG
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctttagctcctgatagtcaatacatccacaccgacaagatcgaaggcgtgtcc
tatcatcttctggcggataaggtgcccacgcctttctatgcgtacagcgccacgcagata
aaagcagactttgccgagcttaaacgcacccttccccaaggcatcgattatttctattcc
ctcaaggccaacccgaataaaacgctgattgctctattgcatcaggccggaacgggctgc
gaagtgtgttccctggtggaactggagattgcattgcgccaaggtgtagcccccggcgat
attattttcgtcgggccgggcaaacacatcaatgaactaacgcaatgctgccttgccggc
attaaagccgtggtggtggaatccatcgaagaaatgcatttgctcaatgatattgccgct
ggcctgggtgtggtccagaacatcgcgctgcgtatcaatcccgacttcaccggcgaaaaa
gccaagttggtaatgagcggcaagccccggcaatttggcatcgatgaacaacttctaccg
caggcatttgctgttctcgggcagcttgtgcaactgcgcctggcggggattcatatttat
cttggtacccgtattcttgattggcaggcccttgccaacaacacgcaaaacatcctggca
ctggctgccacgcttcagcaggattatgaaatagacctcgacttcgtggatgtcggtggt
ggctttggcgtgcgttatttcgacaaagaaaaggcactcgacctggccgccctgggcgag
gccctcctccctgtggtgaacgactactgtcagcgttttccgcgctgcaagatcgttatc
gagcttggccgcttcttggttgcgcgcgcaggcatctttgtcactcgggtcaactacctc
aagccatcccgtgatgagtggtttgccgtatgtgacggcggtgccaactgccacggcagt
gcggctggcatcaattccttgatccgccgcaattttccgatggcgcgtcttggcccgccc
cggcgcaacgatgatcagcaccgctatcaagtgaccggtcccctgtgcacgcccactgat
ttattgggcgaaaacgtcatgctggccgagcttcgttcgggggatctgatcggcatcggg
cattccggcgcctatggtgccagcgcatcaccggtgagctttttaagtttcgggcatccg
gcagaagtacttgtcgaaaatgaccaagcttttctgatccgcacggcggacagcgtagac
accctgctggctccccaggtgtaccaatgtttatccctggcccacggttga
DBGET
integrated database retrieval system