Pseudomonas brassicacearum DF41: CD58_17265
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Entry
CD58_17265 CDS
T03174
Name
(GenBank) LysR family transcriptional regulator
KO
K03566
LysR family transcriptional regulator, glycine cleavage system transcriptional activator
Organism
pbc
Pseudomonas brassicacearum DF41
Brite
KEGG Orthology (KO) [BR:
pbc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pbc03000
]
CD58_17265
Transcription factors [BR:
pbc03000
]
Prokaryotic type
Helix-turn-helix
LysR family
CD58_17265
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_20
Motif
Other DBs
NCBI-ProteinID:
AHL34540
LinkDB
All DBs
Position
complement(3941224..3942165)
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AA seq
313 aa
AA seq
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MRKIPPLNSVRAFEAVARHQSFSAAANELSVTVAAVSHQVRQLEDGLGQKLLERGRTLTL
TPAGKAIYPLLRDGFDQIAQAFALLGGAKEGDAVQVSTTRAFAERWLMPRLAKFNEIYPN
IVVSIHASEKVVDLRSDAVDLAIRYGPVDADVQGPVLFEDRFIAVADRRICPVDRNATMS
DFHNRPLLAFKWKNQALEAPSWSVWLAGMKHGTTGDLRISWYSEETLALHALERGLGPLL
CSDVLIDDELRSGRIRRVEGPTLPGFTYHLIEGHNGSPRRSLALFREWLLGEARSFRGTA
LNDLAGHQLALTS
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaaaataccgcctctgaattccgtgcgagcgtttgaggctgtcgcacgtcaccag
agtttttctgccgctgccaacgagctttctgtaacggtcgccgcggtcagtcatcaagtt
cggcaattggaagacgggttggggcagaagcttctggaaaggggccggacattgaccctc
acgcccgccggtaaagcgatctatccgctgttgcgagacggttttgaccagattgcccag
gcgttcgccctgttaggcggggcaaaggagggtgatgccgtccaggtttccaccacgcgg
gcattcgcggagcgatggctcatgccgcgcctggcgaagttcaacgagatttatccgaac
atcgtagtgtccatccacgcctcggagaaagtcgtggatctgcgttcagacgctgtcgat
ctggcgattcgatatgggccggtcgatgctgatgtgcagggccccgtgctgttcgaggac
cggttcatcgcagtcgccgataggcgtatttgcccggtcgaccgcaacgcaacgatgagc
gactttcataatcgcccgctactggcgttcaaatggaagaaccaggcgctcgaggcgccc
tcatggtcggtctggctggccgggatgaagcacggcacgaccggggatttgcgcatctcc
tggtacagcgaggaaaccctcgcgctgcatgcgctggagcggggcttggggcccttgcta
tgcagcgatgtgttgattgacgatgagcttcgctccgggcgcattcgtcgggtggagggc
cccaccttgccaggttttacctaccatctgatcgaaggccacaacggcagtccacggcgc
agcctggcattgttcagggaatggctcctgggcgaggctaggtcattcaggggcactgcc
ttgaatgacctggcaggacatcaactggcgctcacgtcctga
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