Pseudomonas brassicacearum DF41: CD58_19405
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Entry
CD58_19405 CDS
T03174
Symbol
uvrC
Name
(GenBank) excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
pbc
Pseudomonas brassicacearum DF41
Pathway
pbc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pbc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CD58_19405 (uvrC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbc03400
]
CD58_19405 (uvrC)
DNA repair and recombination proteins [BR:
pbc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CD58_19405 (uvrC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
GIY-YIG_UvrC
UvrC_RNaseH
UvrC_M
HHH_5
GIY-YIG
UVR
HHH
HHH_2
GIY_YIG_2
HHH_3
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
AHL34909
LinkDB
All DBs
Position
complement(4402427..4404250)
Genome browser
AA seq
607 aa
AA seq
DB search
MTELFDPSAFLSTCSGRPGVYRMFDSDARLLYVGKAKNLKKRLASYFRKTGLAPKTAALV
GRIAQVETTITANETEALLLEQTLIKEWRPPYNILLRDDKSYPYVFLSDGAFPRLSIHRG
AKKAKGRYFGPYPSAGAIRESLSLLQKTFFVRQCEDSYYKNRTRPCLQYQIKRCKAPCVG
FVEPEVYAEDVRHSVMFLEGRSNALTDELSAAMEDAAVNLEFERAAELRDQIGLLRRVQD
QQSMEGGSGDVDVVAAFINPGGACVHLISVRGGRVLGSKNFFPQVGIEEDVSEVMAAFLG
QYYISSPERDLPAELIVNVVHEDFPTLIEAIDTLRGRELTISHRVRGTRARWQQLAVTNA
EQALGARLANRQHVAARFDALAEVLNLDEPPQRLECYDISHSSGEATVASCVVFGPEGPI
KSDYRRYNIEGVTPGDDYAAMHQALMRRFGKLKDGEGKLPDILLVDGGKGQLSMARDVLN
ELMVPDLILLGVAKGATRKAGFETLYLNDAAHEFTLKGDSPALHLIQQIRDEAHRFAITG
HRARRGKTRRTSTLEGVAGVGPTRRRDLLKHFGGLQELSRASIEEIAKAPGISKKLAESI
YANLHSE
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgactgaattgtttgatccaagcgcgttcctgtccacctgcagcggtcgcccaggcgtg
taccgcatgttcgacagcgacgcgcgcctgctctatgtgggcaaggccaagaacctcaag
aaacgcctggcgagttactttcgtaaaaccggactcgcaccgaagactgctgccctggtg
gggcgtatcgcgcaagtcgaaaccaccatcaccgccaatgaaaccgaggcgttgctgctt
gagcagacgctgatcaaggagtggcggccgccctacaacatcctgctgcgtgacgataaa
tcctacccgtacgtgttcctgtccgacggggcgttcccgcgcctgagtattcatcgaggg
gcgaagaaggccaagggccgctatttcggtccttatcccagcgccggggcgattcgtgaa
agcctgagcctgttgcagaagactttctttgtgcgccagtgcgaagacagctactacaag
aaccgcacccggccctgcctgcaataccagatcaaacgctgcaaggcgccgtgtgtggga
tttgtcgagcccgaggtctatgccgaggacgtgcgtcactcggtgatgttcctggaaggt
cgcagcaacgcgttgaccgacgagctgtcagcggcgatggaagacgcggcggtcaatctt
gagttcgagcgcgccgccgagttgcgcgaccagatcgggctgttgcggcgcgtgcaggac
cagcaaagcatggaaggtggcagtggcgacgtcgatgtagtcgccgcgttcatcaacccg
ggcggcgcctgtgtgcacttgatcagcgtgcgcggcggtcgtgtgctgggcagcaagaac
ttcttccctcaagtgggcatcgaggaagacgtctccgaggtcatggcggcttttctgggc
cagtactacatcagcagtccggaacgcgacctgcctgccgagttgatcgtcaacgtggtc
cacgaagactttccgaccctgattgaagccatcgatacgcttcgtggtcgcgaactgacc
atcagccaccgcgtacgcggcacccgagcgcgttggcagcaattggccgtgaccaacgcc
gaacaggccttgggtgcgcgccttgccaatcgccaacacgtggcggcgcggttcgatgcc
ttggctgaagtgcttaacctggacgagccaccgcagcgactggagtgctatgacatcagc
cattccagtggcgaggccaccgtggcgtcctgcgtggtgttcggtccggaaggcccgatc
aagtctgattatcgccgctacaacatcgaaggcgtgacgccgggcgatgactacgcggcg
atgcaccaggcgctgatgcggcgcttcggcaagctgaaggacggggagggcaagttgccg
gacatcctgctggtggacggtggcaagggccagctgtccatggcccgcgatgtgctcaat
gagttgatggtccccgacctgatcctgctgggcgtggccaagggcgcaacccgcaaggcc
ggtttcgagaccctgtacctgaacgatgccgcccatgagttcaccctcaagggcgattcg
ccggcgttgcacttgatccagcagatccgtgacgaagcccaccgtttcgccatcaccgga
caccgcgcccgtcgtggcaagacccgccgtacgtctacgctggaaggggtggccggggtc
ggcccgacgcggcgacgcgacttgctaaaacattttggtggattgcaggagctgtctcgt
gccagcatcgaagagatagccaaagcacccggtatcagtaaaaagctcgctgagtcgatt
tatgcaaacctgcacagcgagtag
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