Pseudomonas brassicacearum DF41: CD58_19855
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Entry
CD58_19855 CDS
T03174
Name
(GenBank) LysR family transcriptional regulator
KO
K17737
LysR family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
pbc
Pseudomonas brassicacearum DF41
Brite
KEGG Orthology (KO) [BR:
pbc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pbc03000
]
CD58_19855
Transcription factors [BR:
pbc03000
]
Prokaryotic type
Helix-turn-helix
LysR family
CD58_19855
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_20
HTH_23
MarR_2
FAD_binding_4
DExH14_plug
Motif
Other DBs
NCBI-ProteinID:
AHL34991
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All DBs
Position
complement(4501609..4502511)
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AA seq
300 aa
AA seq
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MTLKQIRAFLAVAQSLSFAVACERLHLSQSALSLTIKALEEGLGGRLFSRNTRNVALTPE
GESLLPLARRLVADWDNAEDEMRQRFTLQRGRVTLAAMPSFAGNLLPPILKTFRARFPNV
NVTVNDVINEQVLEMVRDRHVELGVAFEPMQSSSLAFSPLYLDRFVAVVPLDSPLAQLSE
IKWQTLLEQPFITLQRPSTVRVMLEEHLQARGMRLPVEFESHQLATVGRMVASGLGVSAV
PALCVGQMHELGARCIPLSDPVIERAIGVLTKPGHELSAAAQALFDTLRDQELAVQLAAG
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgaccctcaagcaaatccgcgccttcctcgccgtggcccagagcctgagcttcgccgtg
gcgtgcgaacgtctgcatctgtcccagtcggccctgagcttgacgatcaaggccctggaa
gaaggcctgggcggacgcctgttcagtcgcaatacccgcaacgtggcgctgacgcctgaa
ggtgaatcgttgctgccattggcccgacggctggttgccgactgggacaacgccgaggat
gaaatgcgccaacgcttcaccttgcagcgcggtcgcgtgacgttggcggcgatgccttcg
ttcgctggcaacctgctgccaccgatcctcaagaccttccgcgcccgctttccgaatgtc
aacgtcacggtcaacgatgtgatcaatgagcaggtgctggagatggtgcgtgatcggcat
gtcgagctgggcgtggcgttcgagccgatgcagagttcgtccctggctttcagcccgctg
tacctggatcgtttcgtcgcggtggtgccgctggattcaccgttggcccaactcagcgaa
atcaagtggcaaaccttgctggagcagccgttcattaccctacaacgcccgtccaccgtt
cgggtgatgctggaagaacatttgcaggcccggggcatgagattgcccgtggagttcgag
agccatcagttggcgacggtcggacggatggtcgccagtgggctgggcgtgagcgcggtg
ccggcgctgtgtgtcgggcaaatgcatgagctgggggctcggtgcattccattgagcgat
ccggtgatcgaacgggccatcggcgtgctgaccaaaccggggcatgaactgtcggcggcg
gcgcaggcgttgttcgatacgctcagggatcaggagttggctgtgcagttggccgcaggt
tga
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