Pseudomonas brassicacearum DF41: CD58_20200
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Entry
CD58_20200 CDS
T03174
Name
(GenBank) hydroxymethylglutaryl-CoA lyase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
pbc
Pseudomonas brassicacearum DF41
Pathway
pbc00280
Valine, leucine and isoleucine degradation
pbc00650
Butanoate metabolism
pbc00907
Pinene, camphor and geraniol degradation
pbc01100
Metabolic pathways
pbc01120
Microbial metabolism in diverse environments
pbc04146
Peroxisome
Module
pbc_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pbc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
CD58_20200
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
CD58_20200
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
CD58_20200
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
CD58_20200
Enzymes [BR:
pbc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
CD58_20200
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GFIT
Motif
Pfam:
HMGL-like
DUF732
Motif
Other DBs
NCBI-ProteinID:
AHL35054
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All DBs
Position
4574323..4575222
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AA seq
299 aa
AA seq
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MSLPSFVRLIEVGPRDGLQNEAQPISVADKVRLVDALSAAGLGYIEVGSFVSPKWVPQMA
GSAEVFAQIQRKPGVTYGALAPNLRGFEDALAAGVKEVAVFAAASEAFSQRNINCSIKES
LERFAPIMDAAKQHDVSVRGYVSCVLGCPYEGAVKPEQVAWVARELYAMGCYEVSLGDTI
GTGTAGATRKMFDVVSAEVPRDKLAGHFHDTYGQAMANVYASLLEGIAVFDSSIAGLGGC
PYAKGASGNVATEDVLYLLDGLGIETGVDLDALIAAGRQICDVLGRPTGSRVAKARAAQ
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgtccctaccctcctttgtacgcctgatcgaagtcggcccccgcgacgggctgcagaat
gaagctcaacccatcagcgtcgccgacaaggtgcgcctggtggacgctttgagtgccgcc
ggcctgggctacatcgaggtcggcagttttgtctcgcccaagtgggtgccgcagatggct
ggatccgccgaagtgttcgcgcagatccagcgaaagcccggcgttacctacggtgccctg
gccccgaacctgcgtggttttgaagacgcgttggcggccggcgtgaaagaagtcgcggtg
tttgccgccgcgtccgaagccttctcccagcgcaacatcaactgctccatcaaggaaagc
ctggagcgcttcgcaccgatcatggacgccgcgaaacagcacgatgtcagcgtgcgcggt
tacgtgtcctgcgtgctgggctgcccgtacgaaggcgcggtcaagcccgagcaggtcgcc
tgggtcgcgcgggagctgtatgcgatgggctgttacgaagtgtccctgggcgacaccatc
ggcacaggcaccgccggcgctacgcgcaagatgttcgacgtggtttcggctgaggtgcct
cgcgacaagctcgccggacacttccacgacacctacggccaggccatggccaacgtctac
gccagcctgctggaaggcatcgccgtgttcgacagttccatcgccggccttggcggctgc
ccctatgccaagggcgccagcggtaacgttgccaccgaagatgtgctgtacctgctcgat
ggcttgggcattgaaaccggcgtcgacctggacgcattgatcgccgcggggcggcagatc
tgtgacgtgctcggtcgcccgaccggttcgcgggtcgccaaggcacgcgccgcacagtga
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