Pseudomonas brassicacearum DF41: CD58_20535
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Entry
CD58_20535 CDS
T03174
Name
(GenBank) DeoR faimly transcriptional regulator
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pbc
Pseudomonas brassicacearum DF41
Pathway
pbc00300
Lysine biosynthesis
pbc00470
D-Amino acid metabolism
pbc01100
Metabolic pathways
pbc01110
Biosynthesis of secondary metabolites
pbc01120
Microbial metabolism in diverse environments
pbc01230
Biosynthesis of amino acids
Module
pbc_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pbc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CD58_20535
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CD58_20535
Enzymes [BR:
pbc01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
CD58_20535
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
AHL35114
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All DBs
Position
complement(4643931..4644956)
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AA seq
341 aa
AA seq
DB search
MTQFYDARGNIYAVVSPQQVRARGVDLPHSAARAAQTRQSWAVAAVHAFCAWAPGEAPPD
AKAHRSDGLLIGPFQGEPPFDVLIVNTDGTLAERSGNGLTIFSQALLEQGLIPDDRDCLL
QVHHDQPHGLSPLQTSVRAAGFEGAQGFWLELGQALFGSQAVGARDVENVTFNQRDISRV
AALQALNPGWGNSQFVSIGNPHCVTLVEGAEALPSNPQMRATALSQPLTRIAYAAPCGSG
IPCAMGVNLQWAWLEAEGRIAARVFERGEGPTASSGTSASAVACAAWRVGWVKAGPVSVV
MPGGIVPILLQEQGDEQVRVSLFGTAKPIPEPSAQGSGSVS
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagttttatgatgcgcgcggcaatatttatgcggtcgtttctccacagcaggtc
cgtgcccgcggtgtggacctaccgcactcggcggcccgggccgcacaaacgcgtcaatcc
tgggcagtggctgccgtgcacgccttttgcgcctgggcgccgggcgaagcgccgccggat
gccaaggcccatcgcagtgacggactgttgatcggcccgttccagggtgagccacccttt
gacgttttgatcgtcaacaccgacggcaccctggccgaacgcagcggcaacggcctgacg
attttctcccaggccctgctggagcaaggcttgataccggacgatcgggattgtctgcta
caggttcatcacgaccaaccccacggcttgtcccctctgcaaacgtcggttcgggccgct
gggttcgagggggcgcagggtttttggctggagttgggacaagcgttattcggatctcaa
gcggttggcgcccgcgacgtagaaaacgtgacctttaaccaacgcgatatcagtcgagtc
gccgcgctgcaggcgttgaacccagggtggggcaacagccaattcgtgagcatcggtaac
cctcactgcgtgacgttggtggagggtgccgaggcgttgccgagcaacccgcagatgcgg
gctacggcgttgtcccaacccctgacgcgcatcgcttacgccgctccctgtgggtccgga
attccgtgcgcgatgggtgtgaacctgcaatgggcctggctcgaagccgaagggcggatc
gctgcccgggtattcgaacgaggcgaaggccccaccgcgtcctcgggcaccagcgccagc
gccgtggcctgcgcggcgtggcgggtgggttgggtgaaggcggggccggtgagtgtcgtg
atgcctggcggcattgtgccgatcctgttgcaggaacagggcgatgagcaggtgcgggtc
agcctgttcggcacggccaaacccataccagagccatccgcgcagggttccgggtcggtt
agctga
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