Pseudomonas brassicacearum DF41: CD58_20650
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Entry
CD58_20650 CDS
T03174
Name
(GenBank) ligand-gated channel protein
KO
K16088
outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid
Organism
pbc
Pseudomonas brassicacearum DF41
Brite
KEGG Orthology (KO) [BR:
pbc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pbc02000
]
CD58_20650
Transporters [BR:
pbc02000
]
Other transporters
Pores ion channels [TC:
1
]
CD58_20650
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
STN
Motif
Other DBs
NCBI-ProteinID:
AHL35135
LinkDB
All DBs
Position
complement(4679233..4681698)
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AA seq
821 aa
AA seq
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MSAIHELKPLFKALVMSRGLRSRRVLAGLGLVCVLPLSAQVMAEDVSIDIPAQPLPQALQ
AFGQQTNQQVIYNAADMAGLKSTRVSGKMSPQAAIAELLKGTGVRYSVEGNTLIITRSNA
SSAIELGATTISGRQLGVTTEGTNSYTTGAVTIGKGDQKLKDIPQSVSVLTRKRMDDQNI
TNLTQAIESTPGMSSIKSPGPGMFIYARGFDIETLQYDGVPVPRNVYSLGSYITENMAVY
DRVEFLRGAAGLLQGANSPGGAINMVRKRPQAVPTVTLSAKAGSWDRYASQADVGGPLNS
EGTIRGRAVVNYEKGNSFTDYVSNWEQTVYGAVDFDLSPDTVLGIGASNKKSHSTPYLIG
LPRYSDGTALNLGRSSFAGASWNRAMNDQTSVFLDLEHHFNDNWKVKAAAMAMNESNEAT
YQFITGTIAADGTGARYADYSTDFSTKTLGFDAYVNGDFEALSFKQNVMLGANYTKLKTN
DAFARAFTPGVDIDDINHHRPSPTFDSIADSANLTESTYDVRQKGIYGTWRVNVTEPLTL
IVGARSSWYDFAYDAQTYFARVENADPASSTAKHSGKVTPYYGLVYALNDQWSAYASYSD
VFIPQTVRDTSQSILKPVEGTNYELGLKGELMDGQLNTSFAIFRYDHENRAVSDISGGLA
CDGWYCSVATGKVRSQGFEAEVSGEVAPGLQVSSSYTYNITKFLEDADYKGKVFSTWTPK
HMVRIWADYRLPGDWHKVSVGGGVNTQSSTVSYDRQFDQPGFSIWSSRVGYDLTDEVNLA
VNFNNIFDKKYFIPSYSQLSANNYYGDPRNMMFSVTYKPQF
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcaattcatgagttgaaacctctgttcaaggcactcgtcatgtcccgcggcctg
cgttcacgtcgggtgttggccggtttggggttggtctgcgtactgccactcagcgctcag
gtgatggctgaagacgtcagcatcgacattcctgcgcaaccgctgccgcaagcgctgcaa
gcattcggtcagcagaccaaccagcaagtgatctacaacgccgccgacatggccggcctg
aaaagcacccgcgtcagcggcaagatgagcccgcaggcggccatcgccgaattgctcaag
ggcactggtgtgcgctacagcgtcgaaggcaatacgctgataatcacgcgcagtaatgcg
agttcggcgattgagctgggcgcgacgacaatcagcggccggcaattgggtgtgaccacc
gagggcaccaactcttacaccacgggggcggtgaccatcggaaagggggaccagaagctc
aaggatatcccgcagtcggtcagtgtcttgacccgcaagcgcatggatgaccagaacatc
accaacctgacccaggccattgaaagcacccctgggatgagttcgattaaatcacccggc
cccggcatgttcatctatgcccgtggtttcgatatcgaaacgctgcagtacgacggtgtt
ccggtcccgcgtaatgtttactcgctgggtagctacatcaccgaaaacatggctgtttat
gatcgcgttgaattccttcgtggcgcggctggcctgttgcagggcgccaacagtcctggg
ggcgcgatcaatatggtacgcaaacgcccgcaagccgtgccaacagttacgttgagcgcc
aaggccggcagttgggaccgctatgcaagccaggcggatgtcggcggtccgctgaactcc
gaaggcaccattcgtggtcgggccgtggtcaattatgaaaaaggcaattcgttcacggat
tatgtgtcgaactgggaacagactgtctatggcgccgtggattttgacctgagcccggat
acggtgcttggcatcggtgccagcaataagaaaagtcactccaccccttacctgatcggt
cttccgcgctacagcgacggtacggccttgaacttggggcgctcctcatttgctggcgcc
agttggaaccgagcgatgaatgatcaaacttcggtgttcctggatctggagcaccacttc
aatgataactggaaggtcaaagccgcagctatggccatgaacgagtccaatgaagcgacg
tatcagttcatcaccggtacgatagcggccgatgggaccggtgcgcgttatgcggattat
tcaaccgatttctctaccaagacacttgggttcgatgcctacgtcaatggcgacttcgaa
gcactgtcgttcaaacagaatgtgatgttgggcgccaactacaccaagcttaaaaccaac
gacgctttcgcccgggcttttacacctggagtggacattgacgacatcaatcatcatcga
ccgtcccccaccttcgatagcattgccgacagtgcgaacctgaccgaaagcacctatgac
gtgcggcagaaaggcatttatggcacatggcgcgtcaatgtgacggagccgctgacactg
atcgtcggtgcgcgatccagttggtatgactttgcctatgacgcccagacctattttgct
cgtgtcgagaacgctgatccagcaagcagcacggccaagcatagcggtaaggtcacacca
tactacgggctggtgtatgccctgaacgaccagtggtcggcctacgccagctactcggat
gtgttcattcctcagaccgtgcgcgatacgagtcagtcgatcctcaagccggtcgagggc
accaactacgagttgggcctcaagggcgagctaatggatggccagctcaatacctcgttt
gcgatcttccgatacgatcacgagaaccgtgcggtcagcgacatcagcggtggtctcgct
tgtgatggttggtattgttcggtagcgacgggcaaggtcagaagccaaggtttcgaagct
gaagttagtggtgaagtagcaccgggcttacaggtgtcgagcagctacacctataacatc
acaaagtttctggaagacgcggattacaagggcaaggtgttcagtacctggacacccaag
cacatggtacgtatctgggctgactatcggttgccgggtgactggcacaaagtcagtgtc
gggggtggagtcaacacccagagcagcacggtcagctatgatcgccaattcgatcagccg
ggtttttccatctggagctcgcgagtggggtatgacctgactgatgaagtgaacctggca
gtgaacttcaacaacatattcgataagaagtacttcattccgtcctacagtcagctcagc
gcgaataactactacggtgatccacgcaacatgatgttcagcgtgacgtacaaaccgcag
ttctga
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