Pseudomonas brassicacearum DF41: CD58_21850
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Entry
CD58_21850 CDS
T03174
Symbol
sdhB
Name
(GenBank) succinate dehydrogenase
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
pbc
Pseudomonas brassicacearum DF41
Pathway
pbc00020
Citrate cycle (TCA cycle)
pbc00190
Oxidative phosphorylation
pbc00650
Butanoate metabolism
pbc00720
Other carbon fixation pathways
pbc01100
Metabolic pathways
pbc01110
Biosynthesis of secondary metabolites
pbc01120
Microbial metabolism in diverse environments
pbc01200
Carbon metabolism
Module
pbc_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pbc_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pbc_M00149
Succinate dehydrogenase, prokaryotes
pbc_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
pbc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
CD58_21850 (sdhB)
00650 Butanoate metabolism
CD58_21850 (sdhB)
09102 Energy metabolism
00190 Oxidative phosphorylation
CD58_21850 (sdhB)
00720 Other carbon fixation pathways
CD58_21850 (sdhB)
Enzymes [BR:
pbc01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
CD58_21850 (sdhB)
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Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_17
Fer4_8
Fer4_10
Fer4_7
Fer4_9
Fer4_18
Fer4_2
Fer4
Motif
Other DBs
NCBI-ProteinID:
AHL35353
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All DBs
Position
complement(4935133..4935837)
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AA seq
234 aa
AA seq
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MLQVSVYRYNPDQDAAPFMQDFQVETDGKDLMVLDVLALIKEQDEGFSYRRSCREGVCGS
DGMNINGKNGLACITPLSAVVKGNKLIVRPLPGLPVIRDLVVDMSIFYKQYEKVKPYLQN
DTPAPAIERLQSPEEREKLDGLYECILCACCSTSCPSFWWNPDKFLGPAALLQAYRFLAD
SRDTKTSERLAALDDPFSVFRCRGIMNCVNVCPKGLNPTKAIGHVRNMLLQSGV
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgttgcaagtcagtgtttatcgctacaaccctgatcaggacgccgcgccgttcatgcag
gatttccaggtcgaaaccgacggtaaagacctgatggtgctggatgtgctggccctgatc
aaagagcaggacgagggtttctcctaccgtcgttcttgccgcgagggcgtttgcggctcc
gacggcatgaacatcaacggcaagaacggcttggcctgcattacgccgctgtccgcagtg
gtcaagggcaacaagctgatcgtacgtccgttgccaggtttgccggttatccgtgacctg
gtcgtcgatatgagcatcttctacaagcaatacgagaaggtgaagccatacctgcagaac
gacacgccggctccggccatcgagcgtctgcagtccccggaagagcgtgaaaagctcgac
ggtctgtacgagtgcatcctgtgcgcctgctgctcgacctcgtgcccatccttctggtgg
aacccggacaaattcctgggcccggccgccctgctgcaagcgtatcgcttcctggcagac
agccgtgacaccaagacgtccgagcgtctggcggcactggatgatccgttcagcgtattc
cgctgccgcgggatcatgaactgcgtcaacgtctgcccgaaaggcctgaacccgactaag
gccatcggacacgtgcgtaacatgctgctgcaaagcggcgtgtga
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