KEGG   Pseudomonas brassicacearum DF41: CD58_21855
Entry
CD58_21855        CDS       T03174                                 
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase
  KO
K00239  succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
Organism
pbc  Pseudomonas brassicacearum DF41
Pathway
pbc00020  Citrate cycle (TCA cycle)
pbc00190  Oxidative phosphorylation
pbc00650  Butanoate metabolism
pbc00720  Other carbon fixation pathways
pbc01100  Metabolic pathways
pbc01110  Biosynthesis of secondary metabolites
pbc01120  Microbial metabolism in diverse environments
pbc01200  Carbon metabolism
Module
pbc_M00009  Citrate cycle (TCA cycle, Krebs cycle)
pbc_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pbc_M00149  Succinate dehydrogenase, prokaryotes
pbc_M00982  Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:pbc00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    CD58_21855 (sdhA)
   00650 Butanoate metabolism
    CD58_21855 (sdhA)
  09102 Energy metabolism
   00190 Oxidative phosphorylation
    CD58_21855 (sdhA)
   00720 Other carbon fixation pathways
    CD58_21855 (sdhA)
Enzymes [BR:pbc01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.5  With a quinone or related compound as acceptor
    1.3.5.1  succinate dehydrogenase
     CD58_21855 (sdhA)
SSDB
Motif
Pfam: FAD_binding_2 Succ_DH_flav_C HI0933_like DAO Pyr_redox_2 GIDA Thi4 FAD_binding_3 Pyr_redox_3 FAD_oxidored
Other DBs
NCBI-ProteinID: AHL35354
LinkDB
Position
complement(4935849..4937621)
AA seq 590 aa
MANIPTISFDAIIIGGGGAGMRAALQLAQGGHKTAVITKVFPTRSHTVSAQGGITCAIAS
ADPNDDWRWHMYDTVKGSDYIGDQDAIEYMCQEGPAAVFELDHMGLPFSRTETGRIYQRP
FGGQSKDYGKGGQAARTCAASDRTGHALLHTLYQGNLKAGTTFLNEYYAVDLVKNQDGAF
VGVIAICIETGETTYIRAKATVLATGGAGRIYASTTNALINTGDGVGMALRAGVPVQDIE
MWQFHPTGIAGAGVLVTEGCRGEGGYLINKHGERFMERYAPNAKDLAGRDVVARSMVKEI
IAGNGCGPNGDHVMLKLDHLGEEVLHSRLPGICELSKTFAHVDPVVAPVPVVPTCHYMMG
GVATNIHGQAITQNAEGVDEIIPGLFAVGEVACVSVHGANRLGGNSLLDLVVFGRAAGLH
LEKALSDGIEYDDATDANIEAALARLSALNARTEGEDVATLRRELQNCMQNYFGVFRTGE
YMQKGIAQLAQLRERIANVKINDKSQAFNTARIEALELQNLLEVAEATAIAAEVRKESRG
AHAREDYEDRDDENWLCHTLYFPGDKRVTKRAVNFSPKTVPTFEPKIRTY
NT seq 1773 nt   +upstreamnt  +downstreamnt
atggctaacattcctacgatttctttcgacgccatcatcattggtggtggcggtgccggc
atgcgcgcagcgctgcaactggcgcagggcggtcacaagactgccgtgatcaccaaggtt
ttcccgacccgttcgcacactgtgtccgcccagggcggcatcacctgcgccatcgcttcg
gccgacccgaacgatgactggcgctggcacatgtacgataccgtcaagggttccgactac
atcggtgaccaggacgctatcgaatacatgtgtcaggaaggcccggccgcggtgttcgag
ctggaccacatgggcctgccgttctcgcgtaccgaaaccggccgtatctaccagcgtccg
ttcggtggccagtccaaggactacggcaagggtggccaggcagcgcgtacttgcgcggcg
tccgaccgtaccggtcacgcgctgctgcacaccctgtaccagggcaacctgaaggctggc
accacgttcctgaacgagtactacgccgttgacctggtgaagaaccaggacggcgccttc
gtcggcgtgatcgcgatctgcatcgaaaccggcgagaccacctacatccgtgccaaggcc
accgtgctggcgaccggcggtgctggccgtatctacgcctccaccaccaacgcgctgatc
aacaccggtgacggcgttggcatggccctgcgtgctggcgtgccggtacaagacatcgaa
atgtggcagttccacccaaccggcatcgccggcgccggtgtactggtcaccgaaggttgc
cgcggtgaaggcggttacctgatcaacaagcacggcgagcgtttcatggaacgttatgcg
ccgaacgccaaggacctcgctggtcgtgacgttgtggctcgttcgatggtcaaggaaatc
atcgccggtaacggctgtggcccgaatggcgaccacgtgatgctcaagctcgaccacctg
ggcgaggaagtgctgcacagccgcttgccaggcatctgcgaactgtcgaagaccttcgcc
cacgttgacccggtcgtcgcgccggttccggtggttccaacctgccactatatgatgggc
ggcgttgccaccaacattcacggtcaggcgatcacccagaacgccgaaggcgtggacgaa
atcatccctggcctgttcgcagtgggtgaagtggcttgcgtatcggttcacggtgccaac
cgcctgggcggcaactcgctgctcgacctggtggttttcggccgcgctgccggcctgcac
ctggagaaggcgctgagcgacggtatcgaatacgacgatgccaccgatgccaacatcgaa
gccgccctggcgcgtctgtccgccctgaacgcgcgtaccgaaggcgaagacgtcgctacc
ttgcgtcgcgagctgcaaaactgcatgcagaactacttcggtgtattccgtactggcgaa
tacatgcagaagggtatcgctcagttggcgcaattgcgtgaacgaattgctaacgtgaag
atcaacgataagtcgcaggcgttcaacactgcacgtatcgaagcgctggaactgcagaac
ctgctggaagtggccgaagccaccgccatcgcggctgaagtgcgtaaagagtcccgtggt
gcccatgcccgcgaagactacgaagaccgtgacgacgaaaactggttgtgccacaccttg
tacttcccgggtgataaacgtgtcaccaagcgtgccgtgaacttctcgccgaagaccgtt
ccgacgttcgaacccaagatccggacttactaa

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