Pseudomonas brassicacearum DF41: CD58_22500
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Entry
CD58_22500 CDS
T03174
Name
(GenBank) 23S rRNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
pbc
Pseudomonas brassicacearum DF41
Brite
KEGG Orthology (KO) [BR:
pbc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pbc03009
]
CD58_22500
Enzymes [BR:
pbc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
CD58_22500
Ribosome biogenesis [BR:
pbc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CD58_22500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_25
Methyltransf_31
Methyltr_RsmB-F
Cons_hypoth95
MTS
Methyltransf_11
PCMT
Methyltransf_23
TRM5-TYW2_MTfase
RrnaAD
DREV
Methyltransf_15
Motif
Other DBs
NCBI-ProteinID:
AHL35473
LinkDB
All DBs
Position
complement(5064081..5065451)
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AA seq
456 aa
AA seq
DB search
MAKQERGLRFQPSGGSRAPQVPTGKKQRLTIERLANDGRGIAFVDGRTWFVIGALAGEEV
EARVLGAHGKVVEARTERVFQPSELRRAAPCIHAGRCGGCSVQHLPHDEQLALKQRMLAE
QLSRVAGVEPDEWAAPLSGPEFGYRRRARVAVRWDQKAKKLEVGLRAVGSQDIVAIGDCP
VLVQPLQPIMSRLPDMLRRLSKPQALGHVELFAGSSLALLLRHMTPLSDADLTILKDFCV
FHEAQLWLHGEGEPQPVDPGQALGYRLETWDLDLAYRPGDFIQVNAGVNEAMIAQALQWL
APQAEERVLDLFCGLGNFALPLARHVRQVVAVEGVQTMVDRAAANAVSNNLNNTAFFQAD
LSQPLAGAEWIGEGFSAVLLDPPRDGAFEVVRKLASLGARRLVYVSCNPATLARDTVELI
KQGYRLKRAGILDMFPQTAHVEAMALFEASQDGLSD
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcaagagagaggcctgcgcttccagcccagcggcggaagccgggccccgcaa
gtgcccaccggtaaaaagcagcgcttgaccatcgagcgcctggccaacgatggccggggc
atcgcctttgttgacgggcgcacctggtttgtcatcggcgccctggctggcgaagaggtc
gaggcgcgggtgctgggggcccatggcaaagtggtcgaggcccggaccgagcgtgtgttc
cagcccagtgaactgcggcgtgcggcgccgtgcatccatgccggtcgttgcggcggttgc
agcgtccagcatttgccccatgacgaacaactcgccctgaaacagcgcatgctggccgag
cagttgtcgcgagtggccggggttgaacccgatgagtgggcggcgccgttgagcgggcct
gagttcggttatcgacgtcgcgcccgcgtggcggtgcgctgggatcagaaggcgaaaaag
ctcgaagtgggtttgcgcgccgtcggcagccaggacatcgttgccatcggcgattgtccg
gtactggtacagcccttgcagccgatcatgagccgtctgccggacatgcttcgacgcttg
agcaaaccccaggccctggggcacgtggaattgttcgcgggctcgtccctggcgctgctg
ctgcgacacatgacgccgctgtcggacgccgacctgacgatcctcaaggacttctgtgtt
ttccacgaggcccagttgtggctgcacggtgaaggcgagccgcaaccggtcgatccaggg
caagccttgggttatcgcctggagacctgggacctggacctggcttaccggccgggggat
ttcatccaggtgaacgctggggtcaacgaagcgatgattgcccaggcgctgcaatggctt
gcgccccaagccgaagagcgagtactggatctgttctgcggcctgggcaactttgccttg
cccctggcccggcatgtgcgccaggtggtggccgtggaaggcgtgcaaaccatggtggac
cgtgcggcggccaatgccgtcagcaacaatttgaataacactgccttttttcaggccgat
ttatcccagccactggcaggtgccgaatggatcggcgaaggcttttctgcggtactcttg
gacccaccccgtgacggtgctttcgaggtggtgcgcaagctggcgtccctgggcgccagg
cggttggtatatgtatcgtgcaaccccgcaactttggcgcgggacacggtcgaattgatc
aagcagggctaccggttaaaacgtgccgggattctcgatatgtttcctcaaacggcacat
gtcgaggccatggcgttatttgaagcgagccaggatggcttgtccgactga
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