Pseudomonas brassicacearum DF41: CD58_23445
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Entry
CD58_23445 CDS
T03174
Name
(GenBank) AMP-dependent synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pbc
Pseudomonas brassicacearum DF41
Pathway
pbc00061
Fatty acid biosynthesis
pbc00071
Fatty acid degradation
pbc01100
Metabolic pathways
pbc01212
Fatty acid metabolism
pbc02024
Quorum sensing
pbc04146
Peroxisome
Module
pbc_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pbc00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
CD58_23445
00071 Fatty acid degradation
CD58_23445
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
CD58_23445
09145 Cellular community - prokaryotes
02024 Quorum sensing
CD58_23445
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pbc01004
]
CD58_23445
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pbc04147
]
CD58_23445
Enzymes [BR:
pbc01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
CD58_23445
Lipid biosynthesis proteins [BR:
pbc01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
CD58_23445
Exosome [BR:
pbc04147
]
Exosomal proteins
Exosomal proteins of breast milk
CD58_23445
Exosomal proteins of breast cancer cells
CD58_23445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AHL35645
LinkDB
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Position
complement(5255752..5257317)
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AA seq
521 aa
AA seq
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MSAGFISQLQRALQDNRQAVCAVDWSDSGNESVDLTYGELENRALNLAATLQRRFPRPTH
GAHVVMGIATRNSSDWLVADLACLFAGITALPLPLAFSQSQAEHLAGCCDGFLVDAAGQR
TLAQRWKLNFPDSRLQRINEPLIEQPLLHTPDGEGDWICKIIHTSGTTSRPKGVRLSTRA
VGTVLASLRQGMPADAHRRYLSLVPLSLLLEQVTAAYLPLLAGGTVHFLPPEEPLLGEPG
ASAQRLVDWILQVRPTALTVPPVMVNRFLEQLNEGGEAGERLGSYLKSGAHITCGGAAVS
IDVLRGLAEQGIEVYQGYGLSENASVVSMNTVGQQRLGSVGQPLAHVQVRIGADQTIEVK
SSSLFSGYSGTDPSACSMSDDGWMDTGDLGSLDADGYLYVHGRKKNVICLPNGRNVSPEQ
VELEYRKYPGVNDAAVFFDERHGLVALLCVESTPAREELLAWSAGRFSDIERPNRLWLLT
RDDPLIEQLYTVTGRPKRADIASVFSTLQRTASHEHTCLSL
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctgggttcatcagccagttgcaacgtgcgttgcaagacaatcgccaggccgtc
tgtgcggttgattggtcggactcgggcaatgagtcggtggatttgacctatggcgagctg
gaaaaccgcgcgcttaatctggcagcaacactgcagcggcgtttcccaaggccgacccat
ggcgctcatgtggtgatgggtattgcgacgcgcaacagcagtgactggctggtggccgac
ctggcatgcctgttcgccgggatcactgcgctgccattgccgctggcgttcagccaatcc
caagccgagcacctggccgggtgttgcgacgggtttctggtggatgcggcagggcagcga
acgctggcgcaacgctggaaactgaatttccccgacagccgcctgcaacgcatcaacgaa
ccgctgatcgagcagccactgctccacacgccggacggtgagggcgactggatctgcaaa
atcattcacacctcgggcaccaccagccggccaaagggcgtgcgcctgagtacccgggcg
gtcggcaccgtgctggcgtcgctgcgccaaggtatgccagccgatgctcatcggcgttac
ctgtcgctggtgcctttgagtttgttgcttgaacaggtaaccgccgcctatctgccgctg
ctggcaggtgggaccgtgcattttttaccgccggaagaacccttgctcggcgagccgggg
gcctctgcgcagcgcctggtcgactggatcctgcaggtccggccaacggccctgacggtt
ccgccggtcatggtcaatcgcttcctggagcaactgaacgaagggggcgaggcgggcgag
cgcctggggagttacctgaaatccggcgcccacatcacctgcggcggtgcggcagtgagt
atcgatgtgctgcgcggcctggctgagcaaggcatcgaggtgtaccagggctacgggctt
tctgaaaacgcgtcggtggtcagcatgaacactgtcgggcagcagcgcctgggcagcgtc
ggccagccgttggcccatgtccaggtgcggatcggcgccgaccagaccatcgaggtcaag
agcagctcgctgttcagcggctattcgggtaccgaccccagcgcctgctccatgtccgac
gacggctggatggacaccggtgacctggggtcgctggatgccgatggctacctctacgta
catgggcgcaagaagaacgtgatctgcctgcccaatggccgcaacgtcagccccgagcag
gtggagttggagtatcgcaaatacccgggcgtgaacgacgccgcggtgtttttcgatgag
cgtcacggtttggtggcattgctgtgtgtcgagtcgacaccggcgcgcgaggaactgctt
gcctggtcggcggggcgtttctctgacatcgaacgcccgaaccgactctggttgttgacc
cgtgacgacccgttgatcgagcagttgtataccgtcaccggccggccgaagcgcgccgac
atcgccagtgttttttccactctgcaaaggactgcatcccatgagcacacctgcctttca
ctttga
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