Pseudomonas brassicacearum DF41: CD58_23520
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Entry
CD58_23520 CDS
T03174
Name
(GenBank) crossover junction endodeoxyribonuclease RuvC
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
pbc
Pseudomonas brassicacearum DF41
Pathway
pbc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CD58_23520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbc03400
]
CD58_23520
Enzymes [BR:
pbc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
CD58_23520
DNA repair and recombination proteins [BR:
pbc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CD58_23520
RecFOR pathway proteins
CD58_23520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
DUF3882
Motif
Other DBs
NCBI-ProteinID:
AHL35659
UniProt:
A0AAW8MCX3
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All DBs
Position
complement(5268128..5268652)
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AA seq
174 aa
AA seq
DB search
MTLILGIDPGSRITGYGVVRDTGRGCVYVASGCIRTGAGELHERLQIVYRGVREVIQTYG
PVTMGIEKVFMARNADSALKLGQARGAAIVAGAEESLEIAEYTATQVKQAVVGTGAANKE
QVQMMVMHLLKLVSKPQIDASDALAIAICHAHTRSSLLPHGLGAARSRGGRLRL
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atgactctaatccttggcatcgaccccggttcgcgcatcaccggctacggcgtggttcgt
gataccgggcgcggctgcgtgtacgttgcgtccggctgcatccgcaccggtgccggcgag
ttgcacgagcgcctgcagattgtttatcgcggtgtgcgcgaggtcatccagacctacggt
ccggtcaccatgggcatcgaaaaggtgttcatggcgcgcaacgccgattctgccttgaaa
ctcggccaggcccggggcgcggcgatcgttgccggcgccgaggaaagcctggagatcgcc
gagtacacggcaacccaggtcaagcaggcggtcgtcggaacgggcgcagccaacaaggaa
caggtgcagatgatggtgatgcatctgttgaagctagtcagcaagccgcagatcgacgcc
tccgacgccctggccatcgccatttgccatgcccatacgcgttccagtttgctgccccac
ggtctgggagctgcacgcagtcgtggcgggcgcctgcgtctctga
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