Pseudomonas brassicacearum DF41: CD58_23570
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Entry
CD58_23570 CDS
T03174
Name
(GenBank) porin
KO
K18093
imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
Organism
pbc
Pseudomonas brassicacearum DF41
Pathway
pbc01501
beta-Lactam resistance
pbc02020
Two-component system
Module
pbc_M00745
Imipenem resistance, repression of porin OprD
Brite
KEGG Orthology (KO) [BR:
pbc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CD58_23570
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CD58_23570
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pbc02000
]
CD58_23570
01504 Antimicrobial resistance genes [BR:
pbc01504
]
CD58_23570
Transporters [BR:
pbc02000
]
Other transporters
Pores ion channels [TC:
1
]
CD58_23570
Antimicrobial resistance genes [BR:
pbc01504
]
Gene sets
beta-Lactam resistance modules
Imipenem resistance, repression of porin OprD [MD:
M00745
]
CD58_23570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprD
Motif
Other DBs
NCBI-ProteinID:
AHL35668
LinkDB
All DBs
Position
5275523..5276797
Genome browser
AA seq
424 aa
AA seq
DB search
MRVMKWSMIALAVSAGTSQFAMASSQEESKGFFEDQSLTVKSRMLYMNRDFKHGESNDQS
TPNKAREKGYREETGLGVQAVYESGFTQGTIGFGLDALANGMVKLDSGAGRTGNGMFGKD
SEGHPEDTQSNVGGAVKFRFSDTVLKYGNQYVASPVFSTDDSRLLPEVATGTLITSKEIK
GLELSAGRFTSMRAQNHMGRDSLGLKSADIAGATYQFNDNFVGGVAASDIEDYYKKKYVN
LNYTLPINEDQSLNFDFNGYDSKSQGQELDGDVDNRIWSLAAAYSVGAHKFTLAHQRSSG
DSGYKYGVDGGGTIFLANSIQYSDFNGEDERSWQARYDLNMKSYGVPGLSFMTRYVKGDN
ITTASGDEGKEHEFDFETKYVLQSGPAKDMSFRIRSAIARSNNAYDGGNVNDFRFIVEYP
LSIL
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtgatgaagtggagcatgatcgcactggctgtatcggccggtacctcgcagttc
gcaatggcctcttcccaggaagaatccaagggcttttttgaagatcagagcctaactgtt
aaaagccgtatgctgtacatgaaccgtgatttcaaacacggtgaatccaacgaccagagc
acccctaacaaagctcgtgaaaaaggctaccgcgaagaaaccggtctgggtgtacaggcg
gtttacgagtcgggcttcacccaaggcaccatcggttttggcctggacgcgctggccaat
ggcatggtcaagctggacagcggcgccggtcgtaccggtaacggcatgtttggcaaggat
agcgaaggccatcccgaagacactcaatccaacgttggcggcgcggtcaaattccgcttc
tctgacactgttctgaagtacggcaaccagtacgttgccagccctgtgttctccactgat
gacagccgtctgctgccagaagtcgccaccggtactttgatcaccagcaaggaaatcaaa
ggcctggaattgagcgctggtcgcttcacttccatgcgtgcgcagaaccacatgggtcgc
gacagcctgggcttgaagtctgctgacattgccggtgcaacctaccagttcaatgacaat
tttgtaggcggtgtagccgcttccgacattgaagactactacaagaagaagtacgtcaac
ctgaactacaccctgccgatcaacgaagatcagtccctgaacttcgacttcaacggctac
gatagcaaaagtcagggtcaggagctggacggtgacgttgacaaccgtatctggtccctc
gcggcagcctatagcgtcggcgctcacaagttcaccttggcccaccaacgctcctcgggc
gacagcggctataagtacggcgtagacggcggcggtactatcttcctcgccaactccatc
caatactccgacttcaacggtgaggacgagcgctcctggcaagctcgctacgacctgaac
atgaagagctacggtgttcctggtctgagcttcatgacgcgttacgtcaaaggcgacaac
atcaccaccgcttccggtgatgaaggtaaagaacacgagttcgacttcgagaccaaatac
gttctgcaaagcggtccagcgaaggacatgtctttccgcattcgtagtgcaatcgctcgt
tcgaacaatgcctacgatggcggcaacgtcaacgacttccgcttcatcgtcgaataccca
ctgagcatcttgtaa
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