Pseudomonas brassicacearum DF41: CD58_24915
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Entry
CD58_24915 CDS
T03174
Name
(GenBank) hypothetical protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
pbc
Pseudomonas brassicacearum DF41
Brite
KEGG Orthology (KO) [BR:
pbc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pbc03009
]
CD58_24915
Ribosome biogenesis [BR:
pbc03009
]
Prokaryotic type
ribosomal protein modification factors
CD58_24915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
Motif
Other DBs
NCBI-ProteinID:
AHL35915
LinkDB
All DBs
Position
complement(5595676..5597901)
Genome browser
AA seq
741 aa
AA seq
DB search
MEIKVNFLDNLRLEAKFDDFTVVADQPIRYKGDGSAPGPFDYFLASSALCAAYFVKLYCQ
TRNIPTDNIRLSQNNIVDPENRYNQIFKIQVELPADISDKDRQGILRSIDRCTVKKVVQA
GPEFVIEEVENLDADAQALLMPNSVSQAGTYIAGKDLPLEQTIANMSGILADLGMKIEIA
SWRNIVPNVWSLHIRDAHSPMCFTNGKGATKESALASALGEFIERLNCNFFYNDQFWGED
IANAAFVHYPDERWFKPGRKDALPAEILDEYCLKIYNRDGELRGSHLIDTNSGNEERGIC
SLPYVRQSDGEVVYFPSNLIENLFLSNGMSAGNTLAEAQVQCLSEIFERAVKREIIEGEF
ALPDVPSSVLAKYPGIMAGIQALEEQGFPVLVKDASLGGEFPVMCVTLMNPRTGGVFASF
GAHPSLEVALERSLTELLQGRSFEGLNDLPQPTFEGHAVTEPNNFVEHFIDSSGVVSWRF
FSAKSDYEFVEWDFSGQGENSNAEEAATLFGILEGMGKEVYMAVYEHIGAKACRILVPGY
SEIYPVDDLVWDNTNKALFFRADILNLHRLDEDELQALVERLVESELDDYTDITTLIGIE
FDDNTAWGQLTILELKLLIYLALQQFEEAKEAVETFLQYNDNTVERGLFYQAVNVVLEMQ
LDEDLELEDYEANFRRMFGNERMDAAIGSVDGSVRFHGLTPTSMKLEGLDRHLRLIDSYK
KLHAARANVSALSSGLAPSIG
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaaggtcaactttctcgacaaccttcgacttgaagccaagtttgatgacttt
acggtggtggccgatcaacctatccgctacaaaggcgatggctcggcccccgggccgttc
gattactttctggcttcatcggcgttgtgcgcggcttactttgtgaagctgtattgtcag
acgcgcaatatccccaccgataacattcgcctgtcgcaaaacaatattgttgacccggaa
aatcgctacaaccagatcttcaagatccaggtcgagctgccggcagatatcagcgacaaa
gaccgccaaggcattttgcgttccatcgaccgttgtacggtgaagaaggtcgtgcaagcc
ggacctgagttcgtcattgaagaggtggaaaacctcgacgccgatgcccaggcgttgctg
atgccgaactcggtttcccaagccggcacctatatcgccggcaaggacctgccgctggag
caaaccatcgccaatatgtcgggtattttggcggacctgggcatgaagattgagatcgct
tcgtggcgcaatattgttcccaatgtgtggtcgctgcatattcgcgatgcacactcgccg
atgtgttttaccaatggcaagggcgcgaccaaagagagcgcactggcgtcggcgttgggc
gaattcatcgagcgactgaactgcaactttttctacaacgatcagttctggggcgaagac
atcgccaacgcggcgtttgtgcattacccggacgaacgctggttcaagcctggccgtaaa
gatgcgctgccggcggaaatcctcgacgagtactgcctgaaaatctacaaccgcgacggc
gagctgcgtggctcccacctgatcgacaccaactcgggtaatgaagagcgcggcatctgc
tcgctgccgtacgtgcgccagtcggacggcgaggtggtgtatttcccgtccaacctgatt
gaaaacctgttcctgagcaacggcatgagcgccggtaacaccctggccgaagctcaggtg
caatgtctgtcggagattttcgagcgtgcggtaaaacgcgagatcatcgaaggtgaattt
gccctgccagatgtaccgtccagtgtgctggcgaagtacccgggaattatggccggtatt
caggcgctggaagagcaggggttccccgtcctggtgaaggatgcatccctgggaggggaa
ttcccggtgatgtgcgtcacgttgatgaacccgcgtaccggcggtgtgtttgcctcgttc
ggcgcacacccgagcctggaagtggcgctggaacgcagcctgaccgaattgttgcagggc
cgcagtttcgaaggcctcaatgacttgccccagccgacgttcgaaggtcatgcggtgacc
gagccgaataacttcgtcgagcacttcatcgactccagcggcgtggtgtcgtggcgcttt
ttcagcgccaagtccgattacgagttcgtggagtgggacttctccggccagggtgaaaac
tcgaatgccgaggaggccgcgaccttgttcggcattctcgaaggcatgggcaaggaagtg
tacatggcggtctacgagcatatcggcgcgaaagcgtgtcgcatcctggtgccgggctat
tcggaaatctatcccgtggacgatctggtctgggataacaccaacaaagcgctgtttttc
cgcgccgacatcctgaacctgcatcgcctggacgaagacgaactgcaagcgctggtcgag
cgtctggtggaaagcgagctggacgactacaccgacatcaccaccttgatcggcatcgag
ttcgatgacaacacggcttggggccagttaacgatcctggagttgaagctgctgatctat
ctggccttgcagcagtttgaagaggcgaaggaagcggtggaaaccttcttgcagtacaac
gacaacacggttgagcgcgggttgttctaccaggccgtgaatgtggtgctggagatgcag
ctggacgaagacctggaactggaagactacgaggccaatttccgccggatgtttggcaac
gaacggatggatgcggcgatcggctcggtggatggcagcgtgcgcttccatggcttgacg
ccgaccagcatgaaactggagggtctcgatagacacctgcgcctgatcgacagctacaaa
aaactgcacgcggcgcgggccaatgtgtcggctttatcttctggactcgccccgtcgatt
ggctaa
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