Pseudomonas brassicacearum DF41: CD58_25115
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Entry
CD58_25115 CDS
T03174
Name
(GenBank) penicillin-binding protein
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
pbc
Pseudomonas brassicacearum DF41
Pathway
pbc00550
Peptidoglycan biosynthesis
pbc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pbc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CD58_25115
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pbc01003
]
CD58_25115
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pbc01011
]
CD58_25115
Enzymes [BR:
pbc01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
CD58_25115
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
CD58_25115
Glycosyltransferases [BR:
pbc01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
CD58_25115
Peptidoglycan biosynthesis and degradation proteins [BR:
pbc01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
CD58_25115
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transgly
UB2H
Transpeptidase
UvrB_inter
PBP_1A_C
Motif
Other DBs
NCBI-ProteinID:
AHL35946
LinkDB
All DBs
Position
complement(5642472..5644790)
Genome browser
AA seq
772 aa
AA seq
DB search
MTRTRSPRTPKKPPASRLRPWLGWALKLSLVGLVVLAGFAVYLDAVVQEKFSGKRWTIPA
KVYARPLELFVGQKLSKEDFLTELDALGYRRESVANGPGAASVNGNTVDLNTRGFQFYEG
MEQAQPVRVRFSGDYVAALTGANNASLSVVRLEPLLIGGLYPKNLEDRILIKIDQVPPFL
LDTLIAVEDRDFYHHFGVSPKSIARAVWVNTSSGHMRQGGSTLTQQLVKNFYLTNERSLT
RKLTEAMMALLLEMHYDKQEILEAYLNEVFIGQDGQRAVHGFGLASQFFFSQPLSELKLH
QVALLVGMVKGPSSYNPRRNPERALERRNLVLDLLQQQGVATAEQVEAAKKMPLGVTKRG
SLADSSFPGFMDLVKRQLRQDYRDEDLTEEGLRIFTSFDPILQMKAEASVEDTFKRLGGR
KGAEEVEAAMVVTNPETGEVQAMIGSRQASFAGFNRALDAVRPIGSLIKPAVYLTALEKP
SQYTLTSWLSDETFSVKGADGQVWKPQNYDRRSHGTVFLYQGLAHSYNLSTARLGLEVGV
PNVLKTLARLGVSREFPAFPSMLLGAGGLTPIEVAAMYQTLANGGFNTPMRGIRSVLTAD
GEPLKRYPFQIQQRFDPASIYLIQSAMQRVMREGTGSSVYNVLPRTLNLAGKTGTSNDSR
DSWFAGFSQDLLAVVWLGRDDNGKTPFTGATGALQVWTSFMRKADPLPLDMPQPDNIVQA
WVDSRTGQGSDANCPGAVQMPYIRGSEPPPGAACGGTNPAESVMDWVKDWMN
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgactcgtacccgatccccccgcacccccaagaaaccacccgccagccgcctgcggccc
tggctgggctgggcccttaaactcagcctggttggcctcgtcgtgctcgccggttttgcg
gtctatctcgatgccgtggtccaggagaagttctccggcaagcgctggaccattccggcc
aaggtctacgcccggccgttggagctgttcgtcggacaaaagctgagcaaggaagacttc
ctgaccgaactcgatgccttgggctatcgccgtgaaagcgtggccaatggcccgggcgcg
gcctcggtcaatggcaataccgtcgacctcaatacccgtggcttccagttctacgagggc
atggagcaggcgcaaccggtgcgggtgcgtttctccggcgactacgtggcagcgctgacc
ggcgccaacaacgcgagcctgtcggtggtacgccttgagccgctgctgattggtggtctg
tacccgaagaatctcgaagaccggatcctgatcaagatcgaccaggtgccgccgttcctg
ctcgatacgctgatcgccgtcgaagaccgcgacttctatcatcacttcggtgtctcgccc
aagtcgattgcccgggctgtctgggtcaacacgtcctcgggccatatgcgccagggtggc
agtaccctgacccaacagttggtcaagaacttctacctgaccaacgagcgcagtctcacc
cgcaagctcaccgaagccatgatggcgctgctgctggagatgcactacgacaagcaggag
atcctggaggcgtacctcaacgaggtcttcatcggccaggacggtcagcgggcggtgcac
ggtttcggcctcgccagccagttcttcttcagccagccgttgtccgagctcaagctgcat
caggtggcgttgctggtgggcatggtcaaggggccttcttcctacaacccgcggcgtaat
ccggaacgtgccctcgagcggcgcaacctggtgctcgacctgctacaacaacaaggcgtg
gcaacggccgagcaggtcgaagcggcaaagaaaatgccactgggcgtgaccaagcgcggc
agtctggcggacagctcgttccccggcttcatggacctggtcaagcgccaactgcgtcaa
gattaccgtgacgaagacttgaccgaagagggcctgcggatcttcaccagtttcgacccg
atcctgcaaatgaaggccgaagcgtcggtcgaggacaccttcaaacggctgggcgggcgc
aagggcgccgaagaggtcgaagccgccatggtggtgaccaacccggagactggcgaagtc
caggccatgatcggcagtcgccaggccagcttcgccggcttcaatcgggcgctggatgcg
gtccgcccgattggctccctgatcaagcctgcggtgtacctcaccgcgctggagaaaccg
agccagtacacgctgaccagttggttgtcggacgagacgttctcggtcaagggcgcggac
ggccaagtctggaagccacagaactatgatcgtcgctcccacggcacggtattcctgtac
caggggctggcgcattcctacaacctctcgacggctcgcctcgggctggaagtgggtgtg
ccgaacgtactcaagaccctggcgcgcctgggggtaagccgcgaattcccggcgtttccg
tcgatgctgctgggggccggtggcctcacgccaatcgaggtggccgccatgtaccagacg
ctggccaacggtggtttcaatacgcctatgcgcgggatccgcagtgtgctgaccgccgat
ggcgaaccgctcaagcgttatccgttccagatccagcagcggtttgatccggcttctatt
tatctgatccagagcgctatgcagcgggtcatgcgtgaaggtaccggcagttcggtttat
aacgtgttgcctcggaccctgaacctggcaggcaagaccggtaccagtaacgattcgcgt
gacagttggttcgccggcttcagccaggatctgctggccgtggtctggctcggacgggat
gacaacggcaagaccccgttcaccggtgccaccggcgcgttgcaggtctggaccagtttc
atgcgcaaggccgacccgttgcccctggacatgccgcaaccggacaacatcgttcaggcc
tgggtcgattcgcgcaccggacaaggttccgacgccaattgcccgggcgccgtacagatg
ccgtatattcgcggcagcgagccgccacccggtgctgcctgtggcggcacgaatcccgcc
gagtcggtgatggattgggtcaaggactggatgaattaa
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