Pseudomonas brassicacearum DF41: CD58_25565
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Entry
CD58_25565 CDS
T03174
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pbc
Pseudomonas brassicacearum DF41
Pathway
pbc00260
Glycine, serine and threonine metabolism
pbc00460
Cyanoamino acid metabolism
pbc00630
Glyoxylate and dicarboxylate metabolism
pbc00670
One carbon pool by folate
pbc00680
Methane metabolism
pbc01100
Metabolic pathways
pbc01110
Biosynthesis of secondary metabolites
pbc01120
Microbial metabolism in diverse environments
pbc01200
Carbon metabolism
pbc01230
Biosynthesis of amino acids
pbc01240
Biosynthesis of cofactors
pbc04981
Folate transport and metabolism
Module
pbc_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pbc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
CD58_25565 (glyA)
09102 Energy metabolism
00680 Methane metabolism
CD58_25565 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CD58_25565 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
CD58_25565 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
CD58_25565 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
CD58_25565 (glyA)
Enzymes [BR:
pbc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
CD58_25565 (glyA)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
AHL36025
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Position
5734782..5736035
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AA seq
417 aa
AA seq
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MFSRDLTIAKYDADLFAAMEQEAQRQEEHIELIASENYTSPAVMEAQGSVLTNKYAEGYP
GKRYYGGCEFVDVVEQLAIDRAKELFGADYANVQPHAGSQANAAVYLALLSAGDTILGMS
LAHGGHLTHGASVSSSGKLYNAIQYGIDGNGLIDYDEVERLALEHKPKMIVAGFSAYSQI
LDFPRFRAIADKVGAYLFVDMAHVAGLVAAGVYPNPVPFADVVTTTTHKTLRGPRGGLIL
ARANADIEKKLNSAVFPGAQGGPLEHVIAAKAICFKEALQPEFKAYQQQVVKNAKAMAGV
FIERGFDVVSGGTENHLFLLSLIKQDISGKDADAALGKAFITVNKNSVPNDPRSPFVTSG
LRFGTPAVTTRGFKEAECKELAGWICDILADLNNEAVIDAVREKVKTICKKLPVYGA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagccgtgatttgactattgccaagtacgacgccgatctctttgccgccatggag
caagaagctcagcgccaggaagagcacattgagctgatcgcttcggaaaactacaccagc
cccgcggtgatggaagctcaaggctcggtactgaccaacaagtacgccgaaggttatccg
ggcaagcgctactacggtggttgcgagttcgtcgacgtggtcgagcaactggccatcgac
cgcgccaaggaactgttcggtgccgactacgccaacgtccagccccacgccggttcccag
gccaacgctgccgtgtacctggcgctgctgtcggccggtgacaccatcctgggcatgagc
ctggcccacggcggtcacctgacccacggcgccagtgtttcgtcctcgggcaagctgtac
aacgccatccagtacggcatcgacggcaacggcctgatcgactacgacgaagtcgagcgc
ctggccctcgagcacaagccgaaaatgatcgtggccggcttctcggcctactcgcagatc
ctcgacttcccacgcttccgcgcaatcgccgacaaggtcggtgcctacctgttcgtggac
atggctcacgtggcgggcctggtcgccgctggcgtctacccgaacccggtgccgttcgcc
gacgtggtcaccaccacgacccacaagaccctgcgcggtccacgtggcggcctgatcctg
gctcgcgccaacgccgacatcgagaagaagctgaactccgccgtcttcccgggcgcccag
ggcggtccactggaacacgtgatcgccgccaaggcgatctgcttcaaggaagcgctgcaa
cctgaattcaaggcttatcagcagcaagtggtaaagaacgccaaggccatggccggcgtg
ttcatcgagcgcggcttcgacgtcgtgtcgggcggcaccgagaaccacctgttcctgttg
tccctgatcaagcaggacatctccggcaaagacgctgacgcggccctgggcaaggcgttc
atcaccgtgaacaagaactcggtgccaaacgatcctcgctccccgttcgtcacctccggc
ctgcgcttcggcaccccggccgtgactacccgcggtttcaaggaagccgagtgcaaggaa
ctggccggctggatctgcgacatcctggcagacctgaacaacgaagcggtgatcgacgcc
gttcgtgagaaggtcaagaccatctgcaagaagctgccggtatacggcgcttaa
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