KEGG   Pseudomonas brassicacearum DF41: CD58_25565
Entry
CD58_25565        CDS       T03174                                 
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
pbc  Pseudomonas brassicacearum DF41
Pathway
pbc00260  Glycine, serine and threonine metabolism
pbc00460  Cyanoamino acid metabolism
pbc00630  Glyoxylate and dicarboxylate metabolism
pbc00670  One carbon pool by folate
pbc00680  Methane metabolism
pbc01100  Metabolic pathways
pbc01110  Biosynthesis of secondary metabolites
pbc01120  Microbial metabolism in diverse environments
pbc01200  Carbon metabolism
pbc01230  Biosynthesis of amino acids
pbc01240  Biosynthesis of cofactors
pbc04981  Folate transport and metabolism
Module
pbc_M00975  Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:pbc00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    CD58_25565 (glyA)
  09102 Energy metabolism
   00680 Methane metabolism
    CD58_25565 (glyA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    CD58_25565 (glyA)
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    CD58_25565 (glyA)
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    CD58_25565 (glyA)
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    CD58_25565 (glyA)
Enzymes [BR:pbc01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     CD58_25565 (glyA)
SSDB
Motif
Pfam: SHMT Aminotran_1_2 Beta_elim_lyase Cys_Met_Meta_PP
Other DBs
NCBI-ProteinID: AHL36025
LinkDB
Position
5734782..5736035
AA seq 417 aa
MFSRDLTIAKYDADLFAAMEQEAQRQEEHIELIASENYTSPAVMEAQGSVLTNKYAEGYP
GKRYYGGCEFVDVVEQLAIDRAKELFGADYANVQPHAGSQANAAVYLALLSAGDTILGMS
LAHGGHLTHGASVSSSGKLYNAIQYGIDGNGLIDYDEVERLALEHKPKMIVAGFSAYSQI
LDFPRFRAIADKVGAYLFVDMAHVAGLVAAGVYPNPVPFADVVTTTTHKTLRGPRGGLIL
ARANADIEKKLNSAVFPGAQGGPLEHVIAAKAICFKEALQPEFKAYQQQVVKNAKAMAGV
FIERGFDVVSGGTENHLFLLSLIKQDISGKDADAALGKAFITVNKNSVPNDPRSPFVTSG
LRFGTPAVTTRGFKEAECKELAGWICDILADLNNEAVIDAVREKVKTICKKLPVYGA
NT seq 1254 nt   +upstreamnt  +downstreamnt
atgttcagccgtgatttgactattgccaagtacgacgccgatctctttgccgccatggag
caagaagctcagcgccaggaagagcacattgagctgatcgcttcggaaaactacaccagc
cccgcggtgatggaagctcaaggctcggtactgaccaacaagtacgccgaaggttatccg
ggcaagcgctactacggtggttgcgagttcgtcgacgtggtcgagcaactggccatcgac
cgcgccaaggaactgttcggtgccgactacgccaacgtccagccccacgccggttcccag
gccaacgctgccgtgtacctggcgctgctgtcggccggtgacaccatcctgggcatgagc
ctggcccacggcggtcacctgacccacggcgccagtgtttcgtcctcgggcaagctgtac
aacgccatccagtacggcatcgacggcaacggcctgatcgactacgacgaagtcgagcgc
ctggccctcgagcacaagccgaaaatgatcgtggccggcttctcggcctactcgcagatc
ctcgacttcccacgcttccgcgcaatcgccgacaaggtcggtgcctacctgttcgtggac
atggctcacgtggcgggcctggtcgccgctggcgtctacccgaacccggtgccgttcgcc
gacgtggtcaccaccacgacccacaagaccctgcgcggtccacgtggcggcctgatcctg
gctcgcgccaacgccgacatcgagaagaagctgaactccgccgtcttcccgggcgcccag
ggcggtccactggaacacgtgatcgccgccaaggcgatctgcttcaaggaagcgctgcaa
cctgaattcaaggcttatcagcagcaagtggtaaagaacgccaaggccatggccggcgtg
ttcatcgagcgcggcttcgacgtcgtgtcgggcggcaccgagaaccacctgttcctgttg
tccctgatcaagcaggacatctccggcaaagacgctgacgcggccctgggcaaggcgttc
atcaccgtgaacaagaactcggtgccaaacgatcctcgctccccgttcgtcacctccggc
ctgcgcttcggcaccccggccgtgactacccgcggtttcaaggaagccgagtgcaaggaa
ctggccggctggatctgcgacatcctggcagacctgaacaacgaagcggtgatcgacgcc
gttcgtgagaaggtcaagaccatctgcaagaagctgccggtatacggcgcttaa

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