Pseudomonas brassicacearum DF41: CD58_25780
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Entry
CD58_25780 CDS
T03174
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pbc
Pseudomonas brassicacearum DF41
Pathway
pbc03030
DNA replication
pbc03430
Mismatch repair
pbc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CD58_25780
03430 Mismatch repair
CD58_25780
03440 Homologous recombination
CD58_25780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbc03032
]
CD58_25780
03400 DNA repair and recombination proteins [BR:
pbc03400
]
CD58_25780
Enzymes [BR:
pbc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CD58_25780
DNA replication proteins [BR:
pbc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CD58_25780
DNA repair and recombination proteins [BR:
pbc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CD58_25780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Ribosomal_L26
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AHL36066
LinkDB
All DBs
Position
complement(5778878..5779489)
Genome browser
AA seq
203 aa
AA seq
DB search
MERIAVIDFETTGITPSSSCRATEIAVVILEQGRIVERYQSLMNAGVRVPAFIEQLTGIS
NAMLRGAPSAEKVMNEVNEFVGITPLLAHNAAFDQKFWDFELGRIKRTRLQNFACSLLLA
RRLMPAAPNHKLGTLNAFAGLPHTGQAHRAMADAEMAANLTAHLASELRQKHGLRELSHD
LLCSLQKVPAAKINEHLKRHRGF
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
ttggaacgcatcgcagtcatcgactttgaaaccaccggcatcacgccaagcagcagttgc
cgagccaccgaaattgccgtggtgatcctcgaacagggccggatcgtcgagcgctaccag
agcctgatgaatgccggtgtgcgcgtgcctgcgttcatcgagcaactgaccggcatcagc
aacgccatgctgcgcggcgcgccgtcggcggaaaaggtaatgaacgaggtcaacgagttc
gtcggcatcacgccgctgctggcccacaacgccgcgttcgaccagaagttctgggatttt
gaactggggcgaatcaaacgcacccgcttgcagaactttgcctgttcactgttgctggcc
cgacgcttgatgccggcggcgccgaaccacaagcttggcacgctcaacgcgttcgccggt
ttgccccacaccggccaggctcaccgagccatggccgatgccgaaatggccgccaacctc
accgcgcacctggcctcggagctgcggcaaaagcatgggttgcgggagttgtcccatgac
ctgctgtgcagtctgcagaaagtgccggcggcgaagatcaatgagcatctcaagcggcat
cgtgggttctga
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