Pseudomonas brassicacearum DF41: CD58_25985
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Entry
CD58_25985 CDS
T03174
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
pbc
Pseudomonas brassicacearum DF41
Pathway
pbc00550
Peptidoglycan biosynthesis
pbc01100
Metabolic pathways
pbc01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pbc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CD58_25985
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CD58_25985
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pbc01011
]
CD58_25985
Enzymes [BR:
pbc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
CD58_25985
Peptidoglycan biosynthesis and degradation proteins [BR:
pbc01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
CD58_25985
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
AHL36103
LinkDB
All DBs
Position
complement(5823684..5825579)
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AA seq
631 aa
AA seq
DB search
MPQPIRIKDHEKDARLVRGRVVFGAITVVTLICVLIARLYFLQVIQYEYHSTLSENNRVH
VQPIPPTRGLIFDRNGVVVADNRPSFSLSMTRERSGDWQHVLDVIVEVLQLTPEDRAIFE
KRMRQGRRPFEPVPILFELTEEQIALIAVNQFRLPGVEVVAQLVRHYPQGPHFAHSVGYM
GRINEKELKTLDPVNYSGTHHIGKTGIERFYEPELHGQVGYEEVETNARGRVLRVLKRTD
PIPGKDIVLSLDIKLQEAAEAALGGRRGAVVALDPNTGEVLAMVSQPSFDPNLFVTGISF
KAYSELRDSIDRPLFNRVLRGLYPPGSTIKPAVAIAGLDSGVVNASSRVYDPGYYQLPNY
DHKYRNWNRTGDGYVDLETAIMRSNDTYFYDLAHKLGIDRLSSYLGKFGIGQKVSLDMFE
ESPGLMPSREWKRATRRQAWFPGETLILGIGQGYMQATPLQLAQATALVASKGKWYRPHL
AKTIEGQKPVDPNPMPDIILRNPSDWQKVNNGMQQVMHGARGTARKAAIGAQYRIAGKSG
TAQVVAIKQGEKYDRSKVQERHRDHALFVGFAPADNPKIVVSVMVENGESGSGVAAPVVR
QIMDAWLLDEHGQLKPEYASPTTAEATAREE
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgcctcagccgatccgcatcaaggaccacgaaaaagacgcccgcctggtgcggggccgc
gtcgtgttcggtgccattacggtggtgacgctgatctgcgtgctgatcgcgcggctgtat
ttcctccaggtgattcaatacgagtaccactcgaccctgtcggaaaacaaccgcgtgcat
gtgcagccgattccgccgacccgcgggctgattttcgaccgcaatggcgtggtggtggcg
gataaccggcccagcttcagcctgagcatgacccgtgaacgctccggcgattggcagcat
gtgctcgacgtgatcgtcgaagtgctgcagctgacgcccgaggaccgggcgattttcgaa
aagcgcatgcgccaggggcggcgcccgttcgagccggtgccgatcctgttcgaactgacc
gaagagcagatcgccctgatcgccgtgaaccagttccgcctgcccggcgtcgaggtggtg
gcgcagttggtgcggcattatccccaggggccgcactttgcccactcggtcggctacatg
gggcggatcaacgagaaagagctcaagaccctcgatccggtcaattacagcggcacccac
catatcggcaagaccggcatcgagcgcttctacgagcctgaactgcatggccaggtgggt
tacgaagaggtcgagaccaacgcccgtggccgagtgttgcgggtgctcaagcgcaccgac
ccgattcccggcaaggacatcgtcctgagcctggacatcaagctgcaggaagccgccgaa
gcggcgctgggcgggcgccgtggcgccgtggtggcgctggacccgaacaccggcgaggtc
ctggcgatggtcagccagccgagtttcgacccgaacctgttcgtcaccgggatcagtttc
aaggcctactccgagctgcgcgattccatcgaccggcccttgttcaaccgcgtgctgcgc
ggcctgtatccgccgggctcgaccatcaagcccgccgtggcgattgccgggctggactct
ggcgtggtgaacgcctcgagccgggtctacgaccccggctattaccaactgccgaactac
gatcacaaataccgcaactggaaccgcaccggcgacggttacgtggacctggaaacggcg
atcatgcgctccaacgacacctacttctatgacctggcccataagctggggatcgatcgg
ctgtcgtcctacctgggcaagttcggcatcggccagaaagtctccctggacatgttcgaa
gaatcccccggcctgatgccgtcccgggagtggaagcgcgcgacccggcgccaggcctgg
ttccccggcgaaaccctgatcctggggatcggccagggctacatgcaggcaacgccgctg
caactggcccaggccacggccctggtggcgagcaagggcaagtggtatcgcccgcacctg
gccaagaccatcgaaggccagaagccggtggatccgaacccgatgccggacatcatcctg
cgcaatccgtcggactggcaaaaggtcaacaacggtatgcagcaggtgatgcacggcgcc
cgggggaccgcgcgcaaggcggccatcggcgcgcagtaccgcattgccggcaagagcggt
acggcccaggtcgtcgcgatcaagcagggcgagaagtacgaccgctccaaggtccaggaa
cgccaccgcgaccacgccttgttcgtcggtttcgcgccggccgacaacccgaaaatcgtc
gtgtcggtgatggtcgagaacggtgagtcgggctccggcgtcgccgcgcccgtggtgcgc
cagatcatggacgcctggctgctggatgagcacggccagctcaagcctgaatacgcaagc
cccaccactgcggaggctacggcccgtgaagaataa
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