KEGG   Pseudomonas brassicacearum DF41: CD58_26135
Entry
CD58_26135        CDS       T03174                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
pbc  Pseudomonas brassicacearum DF41
Brite
KEGG Orthology (KO) [BR:pbc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pbc02048]
    CD58_26135
Enzymes [BR:pbc01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     CD58_26135
Prokaryotic defense system [BR:pbc02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   CD58_26135
SSDB
Motif
Pfam: EcoR124_C T1R_D3-like SWI2_SNF2 ResIII HSDR_N DEAD SNF2-rel_dom
Other DBs
NCBI-ProteinID: AHL36132
LinkDB
Position
complement(5856019..5859030)
AA seq 1003 aa
MSEQIIEQGFIDKLIELKYNYRPDITDRASLERNFREKFEALNRVRLTDGEFARLLDEIV
TPDVFAAARTLRERNAFTREDGTPLNYTLVNIKDWCKNSFEVVNQLRINTDNSHHRFDVL
ILINGVPCAQVELKTLGVNPRRAMEQIVEYKNDPGNGYTKTLLCFLQLFIVSNRDNTYYF
ANNNARHFSFNADERFLPIYQFADEANKKITYLDHFAETFLVKCTLGQTISRYMVLIASE
QKLMMMRPYQVYAVKAIVDCIQQNCGNGYIWHTTGSGKTLTSFKASTLLKDNPDIEKCLF
VVDRKDLDRQTREEFNKFQEGCVEENTNTAALVHRLLSEDYADKVIVTTIQKLGLALDES
SKRNKQRKRNGHVTYKEQLAPLRNKRVVFIFDECHRSQFGENHKAIKEFFPKAQLFGFTG
TPIFEENASRVKVEDQQASYQTTDELFQKQLHAYTITHAIEDANVLRFHIDYFKPEGKKT
PKPGEGLAKRAVIEAILSKHDMATAQRRFNAILATASINDAIEYHSLFAEMQHAKQLTDP
DYQPLNIACVFSPPAEGNADVKQIQEDLPQEKQDNEEDPEGKKAALKAILADYNTRYGSN
YNISEFDLYYQDVQKRIKDQQWPNADHPHTQKVDITIVVDMLLTGFDSKYLNTLYVDKNL
KYHGLIQAFSRTNRVLNSTKPYGNILDFRQQQEAVDIAITRFSGEQSGKQAREIWLVDKA
PVVIEKLRTAVQKLDDFMQSQGVACAPEAVHNLKGDDARAAFISHFKEVQRLKTQLDQYT
DLTEDNAAAIEHILPKENLLGFRGAYLETAQRLKAQQDKNGKDAGDGKTDVLDQLDFEFV
LFASAVIDYDYIVALMSRFSQQEPSKQKMSRDQLIGLIQADAKFMNEREDIAAYISTLKA
GEGLSETAIRNGYTRFKQQKDAAELAHIASKHHLDPAVLQSFVDGILQRMIFDGEQLSDL
MAPLDLGWKARALAELALMKELHELLIKRAQGRDISGLSAYEQ
NT seq 3012 nt   +upstreamnt  +downstreamnt
atgagtgagcaaataatcgaacaaggctttattgacaagctaattgagctcaaatacaac
taccgcccagacatcacagaccgcgcctcgctagagcgcaactttcgtgagaaattcgag
gccctcaaccgcgttcgccttactgatggcgaatttgcccgcctgctcgacgagatcgtt
acccctgatgtgtttgcggcggcgcgtaccctgcgcgagcgtaatgccttcacccgcgaa
gacggtaccccgttgaactacacgctggtcaacatcaaagactggtgcaaaaacagcttc
gaggtggtgaaccagctgcgcatcaataccgacaacagccaccaccgttttgatgtgctc
atcctcatcaacggtgtgccgtgcgctcaagtagagctgaaaacgctgggcgtcaatccg
cgccgcgccatggaacagatcgtcgagtacaaaaacgaccccggtaacggctataccaaa
acgttgctgtgtttcctgcagttgttcatcgtcagcaaccgcgacaacacgtactacttc
gccaataataacgcccgtcacttctcgttcaacgccgatgagcgcttcctacccatctac
cagtttgctgacgaggcgaacaaaaagattacctatctcgaccatttcgccgagactttc
cttgtcaaatgtacgcttggccaaacaatcagccgatacatggtgcttattgccagcgag
caaaagctcatgatgatgcgtccgtatcaagtctacgcggtcaaggccatcgtcgactgc
atccagcaaaactgcggcaacggctatatctggcacacaacgggcagcggcaagacactc
acatccttcaaggcgtccaccttgctcaaggacaaccctgatatcgagaaatgtctcttt
gtggtggaccgcaaagacctcgaccgccagacccgtgaggaattcaacaagtttcaggaa
ggctgcgtcgaagaaaataccaacaccgctgctctggtgcaccggctgctgtccgaggac
tacgccgacaaagttatagtcaccaccatccagaagctcggcctcgccctggatgaaagt
agcaaacgtaacaagcagcgcaaacgaaacggccatgtcacctacaaagagcagttggcc
cctctgcgcaacaaacgcgttgtgttcattttcgatgaatgccaccgctcccagtttggc
gagaaccacaaagccatcaaagagttttttcccaaagctcaactcttcggttttaccggc
acgcccatttttgaagaaaatgcctcacgagtaaaagtggaagatcagcaggcttcgtac
caaaccacagatgaactattccagaaacagttgcacgcttacaccatcacccacgctatt
gaagacgccaacgtgctgcgcttccatatcgattacttcaaaccagaaggcaaaaaaaca
cccaagccgggagaaggcttggcaaagcgtgcggtgatcgaagctatcctctcaaaacac
gacatggccaccgcccagcgtcgtttcaatgccattttggctacggcgagcatcaacgac
gccatcgagtaccacagcctgtttgccgagatgcaacatgccaaacaactgaccgaccct
gactatcagccgctgaatatcgcctgcgtattttcgccgcctgccgaaggcaatgcggac
gtaaagcagattcaggaagacctaccgcaagaaaagcaggacaacgaagaagatccagaa
ggcaagaaagcggcgcttaaagccatcctggccgactacaacacccgctacggcagcaat
tacaacattagcgagttcgacctctactaccaggacgtgcaaaagcgcatcaaagaccaa
cagtggcccaatgccgaccacccgcatacgcagaaagtcgacatcaccatcgtggtcgac
atgctgcttaccggcttcgactccaaatacctgaacacgctctacgtggataaaaacctc
aagtatcacggtttgattcaggcgttctcgcgtaccaaccgcgtacttaacagcaccaag
ccctacggtaatattctcgacttccgccagcagcaagaagctgtagatatcgccattacc
cggttctctggcgaacaatccggcaaacaggctcgcgaaatctggctggtggataaggcc
cccgtggttattgaaaaactacggactgccgtgcaaaagctggatgattttatgcaatcg
caaggtgtggcctgcgcaccggaggctgtgcataacctgaaaggcgacgatgcccgcgct
gcttttatcagccacttcaaggaagtgcagcgcctcaaaacccagcttgatcagtacacc
gatctcactgaagacaacgccgccgccattgagcacatccttcccaaggaaaatctcctc
ggctttcgcggtgcttacctggaaacggcccagcgccttaaggcccagcaagataagaac
ggtaaagatgcaggagatggcaaaaccgacgtactggaccagctcgattttgagttcgtg
ctcttcgcctctgctgttattgactacgactacatcgtggcgctgatgtcgcgcttctcg
cagcaggaacctagcaaacagaagatgagtcgcgatcagcttattggtctgatccaggct
gatgccaagtttatgaacgagcgcgaggacattgccgcctatatctccacgctcaaagcg
ggggagggcctgagcgaaaccgctatccgcaacggctatacccgcttcaagcaacaaaaa
gacgccgccgaactcgcccacattgcaagcaaacatcatctagatccagctgttttacaa
agctttgtggatggcattctccagcgcatgatcttcgatggcgaacagctcagtgacctt
atggccccgctcgacctcggttggaaagcacgtgctctggccgaactcgctctgatgaaa
gaacttcacgagctacttatcaagcgcgcccaaggccgcgatatctcaggacttagcgcg
tatgagcagtaa

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