Pseudomonas brassicacearum DF41: CD58_26870
Help
Entry
CD58_26870 CDS
T03174
Name
(GenBank) cyclic AMP receptor protein
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
pbc
Pseudomonas brassicacearum DF41
Pathway
pbc02020
Two-component system
pbc02024
Quorum sensing
pbc02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pbc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CD58_26870
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CD58_26870
02025 Biofilm formation - Pseudomonas aeruginosa
CD58_26870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pbc03000
]
CD58_26870
Transcription factors [BR:
pbc03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
CD58_26870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
Crp
MarR_2
TrmB
MarR
HTH_11
HTH_28
Phage_NinH
Motif
Other DBs
NCBI-ProteinID:
AHL36265
LinkDB
All DBs
Position
6002900..6003544
Genome browser
AA seq
214 aa
AA seq
DB search
MVAITPTLKIKNLDKLLMHCQRRRYPAKHNIICAGDRSETLFFIIKGSVTILIEDDDGRE
MIIAYLNSGDFFGELGLFEQAGKEQVRSAWVRAKIECEVAEISYSKFRELSVQDPDILYV
LSGQIAQRLRNTTRKVGDLAFFDVTGRVARCLLELCKQPDAMTHPDGMQIKVTRQEIGRI
VGCSREMVGRVLKDLEERNLVSVKGKTMVVYGTR
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atggttgccattactcccacgctcaagatcaagaacctcgacaaactcctgatgcattgt
cagcgtcgccgctacccagccaagcacaacatcatttgcgcgggcgatcgctctgagacg
ctgtttttcatcatcaagggatcggtcactatcctgatcgaggatgacgacggtcgggaa
atgatcatcgcctatctcaactcgggggactttttcggcgaactggggttgttcgaacag
gcaggcaaggaacaggtgcgcagcgcctgggtacgcgcgaagatcgaatgtgaggtcgcg
gaaatcagctacagcaagttccgggaactgtctgtgcaagacccggacattctttacgtc
ctcagcggacaaattgcacagcgcctgcgcaataccacccgcaaggtgggcgaccttgcc
ttcttcgacgtcaccggtcgcgtcgcccgatgcctgctggagttgtgcaaacaaccggat
gccatgacccacccggacggcatgcagatcaaagtaacccgccaggaaatcggccggatt
gtcggctgctctcgggaaatggtcggtcgagtgctcaaggacttggaggagcgcaacctg
gtcagcgtcaaaggcaagaccatggtggtgtacggaacgcgttag
DBGET
integrated database retrieval system
