Pseudomonas brassicacearum DF41: CD58_27240
Help
Entry
CD58_27240 CDS
T03174
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pbc
Pseudomonas brassicacearum DF41
Pathway
pbc03030
DNA replication
pbc03430
Mismatch repair
pbc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CD58_27240
03430 Mismatch repair
CD58_27240
03440 Homologous recombination
CD58_27240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbc03032
]
CD58_27240
03400 DNA repair and recombination proteins [BR:
pbc03400
]
CD58_27240
Enzymes [BR:
pbc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CD58_27240
DNA replication proteins [BR:
pbc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CD58_27240
DNA repair and recombination proteins [BR:
pbc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CD58_27240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DUF7833
Motif
Other DBs
NCBI-ProteinID:
AHL36334
LinkDB
All DBs
Position
6088738..6089445
Genome browser
AA seq
235 aa
AA seq
DB search
MSIFSWLRPAQPTLPDVLQQRLERLPAPSPLDERSWREQRWVMLDLETTGLNLNKDQVLS
IGAVVIEDGAIDFSQQFERTLQCDKQKLGPSVLIHGLAPSAIAAGSNPAEALLAFMEFVG
DSPLLAFHAPFDSHMLGRALKDYLGYRLQHLFLDVADLAPMLCPQAHLRKAGLDEWIDWF
KLQVFDRHNASADALATAELALILFSRARQQQIQSPLDLQQRLGQWKRRQQAPSL
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
gtgagtattttttcctggctgcgtccggcccagccgacgttgcccgacgtactgcagcag
cgcctggaacgcctgcccgcgccctcgccactggatgagcgcagctggcgagaacagcgc
tgggtcatgctggatctggaaaccaccggcctgaacctgaacaaggatcaggtgctgtcc
attggtgcagtggtcatagaagacggcgctatcgatttcagccagcaattcgaacgcacc
ttgcaatgcgacaagcagaagctggggcccagtgtgctgatccacggcctggcccccagt
gccatcgccgccggcagcaatccggccgaggcgctgctggcgttcatggaattcgtcggc
gacagcccgctgctggcctttcacgcgccgttcgattcccacatgctcgggcgggccctg
aaggattacctgggttatcgcttgcagcatctgttcctggatgtggcagacctggcaccc
atgctttgtccccaggcccatttacgcaaggcgggtctggacgaatggatcgactggttc
aagctgcaagtcttcgaccgccacaacgccagcgccgacgccctggccaccgccgaattg
gcgctgattctgttcagccgcgctcgccagcaacagatccagagcccgctggacctgcaa
cagcggttgggccagtggaagcggcggcagcaggcgccttcgctttaa
DBGET
integrated database retrieval system
