Pseudomonas brassicacearum DF41: CD58_27370
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Entry
CD58_27370 CDS
T03174
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pbc
Pseudomonas brassicacearum DF41
Pathway
pbc00260
Glycine, serine and threonine metabolism
pbc00460
Cyanoamino acid metabolism
pbc00630
Glyoxylate and dicarboxylate metabolism
pbc00670
One carbon pool by folate
pbc00680
Methane metabolism
pbc01100
Metabolic pathways
pbc01110
Biosynthesis of secondary metabolites
pbc01120
Microbial metabolism in diverse environments
pbc01200
Carbon metabolism
pbc01230
Biosynthesis of amino acids
pbc01240
Biosynthesis of cofactors
pbc04981
Folate transport and metabolism
Module
pbc_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pbc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
CD58_27370 (glyA)
09102 Energy metabolism
00680 Methane metabolism
CD58_27370 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CD58_27370 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
CD58_27370 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
CD58_27370 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
CD58_27370 (glyA)
Enzymes [BR:
pbc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
CD58_27370 (glyA)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Cys_Met_Meta_PP
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AHL36358
LinkDB
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Position
complement(6115196..6116449)
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AA seq
417 aa
AA seq
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MFSKQDQIQGYDDALLAAMNAEEQRQEDHIELIASENYTSKRVMQAQGSGLTNKYAEGYP
GKRYYGGCEHVDKVEALAIERAKQLFGADYANVQPHSGSSANSAVYLALLQAGDTILGMS
LAHGGHLTHGAKVSSSGKLYNAVQYGIDTTTGLIDYDEVERLAVEHKPKMIVAGFSAYSK
TLDFPRFRQIADKVGALLFVDMAHVAGLVAAGLYPNPLPYADVVTTTTHKTLRGPRGGLI
LAKANEEIEKKLNAAVFPGAQGGPLMHVIAGKAVCFKEAAEPGFKVYQQQVIDNAQAMAG
VFIKRGYDVVSGGTDNHLFLVSLIRQGLTGKDADAALGRAHITVNKNAVPNDPQSPFVTS
GLRIGTPAVTTRGFKVSQCVTLAGWICDILDNLGDADVEANVAQQVAALCADFPVYR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaagcaagatcagattcaaggttacgacgatgcactgctggcggcgatgaac
gccgaagagcaacgccaggaagatcacatcgagctgatcgcgtcagaaaactacaccagc
aagcgcgtgatgcaggcccagggcagcggcctgaccaacaagtacgccgaaggctatccg
ggcaagcgctactacggtggctgcgagcacgtcgacaaagtcgaagccctggccatcgaa
cgcgccaagcaactgttcggcgccgattacgccaacgtccagccgcactccgggtcttcg
gccaacagcgccgtgtacctggccttgctgcaggccggcgacaccatcctgggcatgagc
ctggcccacggtggtcacctgacccacggcgccaaagtgtcgtcctcgggcaagctctat
aacgcggtgcaatacggcatcgacaccaccaccggcctgatcgactacgacgaagttgag
cgcctggcggtcgagcacaagccgaaaatgatcgtggccggtttctcggcttactccaag
accctcgacttcccacgtttccgtcagatcgccgacaaagtcggtgccctgctgttcgtc
gacatggcccacgtggccggtctggtcgccgccggtctgtacccgaacccgctgccgtac
gccgacgtggtcaccaccaccacccacaaaaccctgcgcggtccacgtggtggcctgatc
ctggccaaggccaacgaagagatcgagaaaaagctcaacgccgcagtattcccgggcgcc
cagggcggcccgctgatgcacgtgatcgccggcaaggcagtgtgcttcaaggaagcggcg
gagccaggcttcaaggtttaccagcagcaagtgatcgataacgcccaggccatggctggc
gtgttcatcaagcgcggctacgatgtagtgtccggtggcaccgataaccacctgttcctg
gtcagcctgattcgtcagggcctgaccggcaaggatgccgatgctgccttgggccgcgcc
cacatcaccgtgaacaagaacgctgtgccgaacgatccgcaatcgccgttcgtgacttcg
ggtctgcgcatcggcaccccggcggtgaccactcgcggtttcaaggtctcccagtgcgtc
acgctggccggctggatctgcgacatcctcgacaacctcggcgacgccgatgtcgaggcc
aacgttgcccagcaagtagcggccctgtgcgcggacttcccggtttatcgctga
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