Pseudomonas brassicacearum DF41: CD58_27410
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Entry
CD58_27410 CDS
T03174
Name
(GenBank) choline dehydrogenase
KO
K03333
cholesterol oxidase [EC:
1.1.3.6
]
Organism
pbc
Pseudomonas brassicacearum DF41
Pathway
pbc00984
Steroid degradation
pbc01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
pbc00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00984 Steroid degradation
CD58_27410
Enzymes [BR:
pbc01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.3 With oxygen as acceptor
1.1.3.6 cholesterol oxidase
CD58_27410
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GMC_oxred_C
GMC_oxred_N
DAO
Abhydrolase_6
Pyr_redox_2
Abhydrolase_1
FAD_binding_2
FAD_oxidored
NAD_binding_8
FAD_binding_3
HI0933_like
Thi4
Pyr_redox
GIDA
Fer4_9
Fer4_2
DUF4917
Fer4_6
Lycopene_cycl
GDI
Motif
Other DBs
NCBI-ProteinID:
AHL36365
UniProt:
W8QJA8
LinkDB
All DBs
Position
complement(6124937..6128389)
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AA seq
1150 aa
AA seq
DB search
MTRISTPISDIQEHYDVIVIGSGYGGGIAASRLSRAGRKVCLLERGREIQPGEYPNTMLA
ATEELQVHDPDGHIGSRTGLFDLHVNAQQNVVVGCGLGGTSLINANVSLEPEPGVFDDPR
WPLAVREHRDTLLKEGYARAREMLKPNPYPDSSPKLPKLDANRKSASYLKQDAHFYKPPI
NVTFDKLPNNLNHVGVEQLPCNGCGDCVSGCNNKAKNTTLMNYLPDAWNHGAEIFCQAEV
RHLERDGNGWIVHFQYLGSGRELFSAPTLFVRADIVVVSAGTLGSTEIMLRSRDKGLSMS
AQLGENMSGNGDILGFGHNCDQTINGIGFGAHSAKELEPVGPCITSIIDMRTEGDWRSRM
VIEEGSIPGALGRPMVPSMAAFAEMIGVPTDTGFGASLKYKGREAESFLRGPYYGALHNM
QTYLIMSHDNGKGRMVLDNKDQLRIDWPGVGEQENVTLGNERLHQSTKALGGIWVENPIW
TKLLKHSIVSVHPLGGCVMGEDATQGVVNHKGQVFSGASGTDVYPGLYVTDGAVIPTSLA
VNPLLTISAVSERNMGLLAADWGWIIDYTLPSAPRKPVAPPTLGVQFTETMKGYFSSAFT
QAQGTDLTLYEAAAKRGKADNSSIEFTLTITAADLNRLIKEPEHAATLVGTLDAPLLSPK
PLVASNGVFNLFEQYQEQVGVRHMNYDMKLTAEDGSDYYFSAFKTVPEDDGVLNIWHDTS
TLYVTLYRGPDKTGEVIGSGVMHILPADFAKQMTTMKVLNARNERERVEALARFGKFFAG
ILWESYGGVFAGDIYFNPDAPPRLKRPLDAPAPTVHFFPTEDNVELRLTRYQAGSKGPVM
LVHGLGVGSNIFSTDTIHTNLLEYLCKHEYDVWLLDLRVSILLPASKHEWNGDQVAQYDF
KAAIEQIQLATLARDVQCVVHCYGATTFFMSMLAGLQGVRSVVCSQIAADTVVATATGLK
AGLHLPGMLDAIGIKSLTAYADTKENWFNKLYDKALNGYARIEAQGYCTNPVCHRITFMY
ASLYRHDTLNETLHDNLHELFGESNMHTFEHLALIVRKGHLVDFKGNDVYMPHFDRLKLP
ICFISGADNQCYLPQSTLKTYERLCDMHGPQLFSRHEVPGYGHIDCMFGKDAVVDVYPII
LEHLEKTALG
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgacacggatctcgacccccatcagtgacatccaggagcattacgacgtgatcgttatc
ggctcgggctatggcggcggtatcgctgcttcgcgcctgtcccgggccggacgcaaagtg
tgcctgctggagcgtggccgggagatccagcccggcgaataccccaacaccatgctcgcc
gccaccgaggaactgcaggtgcacgacccggacggccacatcggttcgcgtaccgggctg
ttcgacctgcacgtcaacgcccagcagaacgtggtggtcggttgcggcctgggcggcaca
tcgctgatcaatgccaacgtttccctcgagccggagcccggtgtgttcgatgatccgcgc
tggccgctggcggtgcgtgaacaccgcgacacgctgctcaaggagggctatgcgcgggcc
cgggagatgctcaagcccaatccttatccggattcgtcgccgaagctgcccaagctcgac
gccaaccgcaaatcggcgagttacctcaagcaggacgcgcatttctacaagccgcccatc
aatgtgaccttcgacaaactgcccaacaacctcaaccacgtcggcgtcgagcaattgccg
tgcaacggttgtggcgattgcgtctcggggtgtaacaacaaggcgaagaacaccacgttg
atgaattacctgccagatgcctggaaccacggcgcggagattttctgccaggccgaagtc
aggcacctggagcgcgacggcaatggctggatcgtgcacttccagtacctgggcagtggc
cgcgagctgttctcggcgccgaccctgttcgtgcgtgccgacatcgtggtggtgtccgcc
gggaccctgggttccaccgagatcatgttgcggtcccgggacaaaggcctgtcgatgtcc
gcccagttgggcgagaacatgagcggcaacggcgacatcctcggcttcggccacaactgc
gaccagaccatcaacggcattggcttcggcgcccattcggccaaggagctggagccggtg
ggcccgtgcatcacctcgatcatcgacatgcgcaccgaaggcgactggcgcagccgcatg
gtcatcgaggagggctcgatccccggcgcccttggccggcccatggtgccgagcatggcc
gcgttcgccgagatgatcggggtgcccaccgacacggggttcggggccagcctcaaatac
aaaggccgggaagccgagagtttcctgcgtggcccgtattacggcgcgctgcataacatg
cagacctacctgatcatgagtcacgacaacggcaaaggccgcatggtgctcgacaacaag
gaccagttgcgcatcgattggcccggcgttggcgagcaggaaaacgtcaccctcggcaat
gagcgcttgcaccagagcaccaaggcgctcggtgggatctgggtcgagaacccgatctgg
accaagctgctcaagcacagcatcgtgtcggtccatccgttgggcggttgcgtgatgggt
gaagatgcgacgcaaggcgtggtcaaccataagggccaggtgttcagcggcgccagcggc
acggatgtctaccccggcctctacgtgaccgacggtgcggtgatccccacctccctggcg
gtcaacccgctgctgaccatctcggcggtgagcgagcgcaacatgggtctgctggcggct
gactggggctggatcatcgactacacgctgccctcggccccacgcaaacccgtggcgccg
ccgaccctcggcgtgcagttcaccgaaaccatgaagggctacttttccagcgccttcacc
caggcccagggcaccgatctgaccctgtacgaagcggcggccaagcgcggcaaggccgac
aactcgtccatcgagttcaccctgaccatcaccgccgccgacctcaatcggctgatcaag
gaaccggaacacgccgcgaccctggtgggcaccctggatgcgccgctgctctcgcctaaa
ccactggtcgccagcaatggcgtgttcaacctgttcgagcaataccaggaacaggtcggc
gtgcggcacatgaactacgacatgaagctgactgccgaggacggcagcgattactacttc
agcgccttcaagaccgtgcccgaggacgacggcgtgctgaacatctggcacgacaccagc
acgttgtatgtcacgctgtatcgcggaccggacaagaccggcgaggtgatcggctcgggg
gtgatgcacattctgccggctgacttcgccaagcagatgaccaccatgaaagtgctcaac
gcccgcaacgagcgcgagcgcgtggaggcgctggcgcggttcggcaagttcttcgccggc
atcttgtgggagagctatggcggggtcttcgccggcgatatctacttcaacccggacgcc
ccgccccgtctcaaacgaccgctggatgccccggcgccgaccgtgcatttcttcccgacc
gaagacaacgtcgagctgcgcctgacccgttaccaggccggcagcaagggcccggtgatg
ctggtgcatggcctgggcgtgggctcgaatattttctccaccgacaccatccataccaac
ttgctggagtacctgtgcaagcacgagtacgacgtctggctcctggacttgcgggtgagc
atcctgttgccggccagcaagcacgaatggaacggcgaccaggtggcccagtacgatttc
aaggcggctatcgagcagatccagctagcgaccctggcccgtgacgtgcagtgcgtggtg
cattgttatggcgcgacgaccttcttcatgtcgatgctggcggggttgcaaggggtgcgc
tcggtggtctgttcacagatcgccgccgacacggtggtggccaccgctaccggtttgaaa
gccgggctgcacttgccgggcatgctcgacgccattggcatcaagtccctcacggcttac
gccgacaccaaggaaaactggttcaacaaactctacgacaaggccctcaacggttatgcc
cggatcgaggcccagggctactgcaccaacccggtctgccaccgcatcacattcatgtat
gcgtcgctgtaccgccacgacaccctcaacgaaaccttgcacgacaacctgcacgaattg
ttcggcgaatcgaacatgcacactttcgagcacctggcgctgattgtgcgtaaggggcac
ttggtggacttcaagggcaacgacgtctacatgccgcatttcgatcggctgaagttgccg
atctgcttcatcagcggcgccgacaaccaatgctacctgccgcagagcaccctcaagacc
tatgagcgactgtgcgatatgcacggcccgcaattgttcagccgccacgaagtgccgggc
tacggccacatcgattgcatgttcggcaaggatgcggtggtggatgtgtatccgatcatt
cttgagcacctggagaagaccgccctcggttag
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