Pseudomonas brassicacearum DF41: CD58_28675
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Entry
CD58_28675 CDS
T03174
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pbc
Pseudomonas brassicacearum DF41
Pathway
pbc00300
Lysine biosynthesis
pbc00470
D-Amino acid metabolism
pbc01100
Metabolic pathways
pbc01110
Biosynthesis of secondary metabolites
pbc01120
Microbial metabolism in diverse environments
pbc01230
Biosynthesis of amino acids
Module
pbc_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pbc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CD58_28675
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CD58_28675
Enzymes [BR:
pbc01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
CD58_28675
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Ortholog
Paralog
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
SPO11_like
Tail_completion_gp17
Motif
Other DBs
NCBI-ProteinID:
AHL36606
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Position
6391874..6392704
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AA seq
276 aa
AA seq
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MLLRFTKMHGLGNDFMVLDLVSQHAHILPKHAKQWGDRHTGIGFDQLLIVEAPNNPDVDF
RYRIFNADGSEVEQCGNGARCFARFVLDKRLTAKRQIRVETKSGIIELDVRSDGQIGVNM
GPPRLVPADIPFEAPAQALSYQVDVDGTTVELAAVSMGNPHAVLRVADINSAAVHELGPK
IEHHPRFPARVNVGFLQVIDRHRAQLRVWERGAGETQACGTGACAAAVAAISQGWMDSPL
LIDLPGGRLSIEWAGPGQPVMMTGPAVRVYEGQVRL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgcgttttaccaagatgcacggcctgggcaatgacttcatggtcctcgacctg
gtcagccagcacgcgcacatcctgcccaagcacgccaagcaatggggggatcggcacacc
ggtatcggtttcgaccaattgctgatcgtcgaggcgcccaacaaccccgacgtggatttc
cgctaccgtatcttcaatgccgacggttcggaagtggagcagtgcggcaacggcgcgcgc
tgcttcgcccgcttcgtgctggacaaacgcctgaccgccaagcggcagatccgtgtcgag
accaaaagcggcatcatcgaactggatgtgcgcagtgatggccagatcggcgtcaacatg
ggccccccgcgcctggtaccggcggacattccgttcgaagcgccggcccaggccttgagc
tatcaggtggacgtcgacggcactacggtagaactggcggcggtgtccatgggcaacccc
catgccgtgctgcgagtggccgatatcaacagcgccgcggtgcatgagctggggccgaag
atcgagcaccatccgcgcttcccggcacgggtgaacgtcggtttcctgcaagtcatcgac
cgtcaccgcgcgcaattgcgcgtctgggaacgcggcgccggggaaacccaagcctgcggc
accggcgcttgtgcggcggcagtcgcggcgatcagccaggggtggatggattcgccattg
ttgatcgacctgccgggcgggcgcctgtccatcgagtgggcaggccctggccaaccggtg
atgatgaccggtccggcggtacgcgtatacgaaggacaagttcgtctttga
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