Pseudomonas brassicacearum DF41: CD58_29035 Help Entry CD58_29035        CDS       T03174                                  Name (GenBank) type VI secretion protein IcmF   KO K11891   type VI secretion system protein ImpL Organism pbc  Pseudomonas brassicacearum DF41 Pathway pbc02025   Biofilm formation - Pseudomonas aeruginosa pbc03070   Bacterial secretion system Brite KEGG Orthology (KO) [BR:pbc00001]  09130 Environmental Information Processing   09131 Membrane transport    03070 Bacterial secretion system     CD58_29035  09140 Cellular Processes   09145 Cellular community - prokaryotes    02025 Biofilm formation - Pseudomonas aeruginosa     CD58_29035  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    02044 Secretion system [BR:pbc02044]     CD58_29035 Secretion system [BR:pbc02044]  Type VI secretion system   Imp/Vas secretion system core components    CD58_29035 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  IcmF-related_N IcmF-related IcmF_C IcmF_helical AAA_10 Bax1-I T7_gp14 Motif Other DBs NCBI-ProteinID:  AHL36674 LinkDB All DBs Position complement(6466715..6470215) Genome browser AA seq 1166 aa AA seqDB search MKAFFSFMTRWVIPLLGLIALSLIIWFVGPLLEWLVPEGRRWALIILVFAVWIAYRVFRI IQARRQAAEVMRSLAAQTPPDPTSIATAEELETLRQRMDEALALLKKAKLGGDERRNLYE LPWYVIIGPPGSGKTTALVNSGLHFPLAAQLGAGAVRGVGGTRNCDWWFTDQAVLLDTAG RYTTQDSDATVDKAAWLGFLGLLKKQRARRPIDGAFIAISLSDLLLGSDAERAAHAAAIR LRIQELYTQLGVRFPIYLMLTKLDLVPGFMEYFDTLSKEERAQVWGMTFALDDGKSNDSP LAHLQSEFTGLEQRLNDRLVERLQQERDPARRDLIYGFPQQFGALKDCLQSFLEGVFKPN AFEERVLLRGVYFTSGTQEGSPIDRLIGSMAQSMNLDRQHLARQTGTGRSYFIEKLFTAV AFAERGLVGVDPKVERRRKWIARGVLASTVAVVLVVGTLWWVSYRANQAYITQVDQKVAP LGQTVQNLSPAQRDVLAVLPLLNAVKHLADDAPDWAEGLGLYQGDMLEAESGSVYRKLLI AVFAPRLLTRVEEQLHGGGNSDFLYEGLKAYLMLADTEHYDADFIKAWIALDWDRSLPRD LPAEQRLALSEHLQALFERRPPTARLDPRLIEDLRRQLQQLPVAQRVYDRIKRQKLPEGV PDFRINEAAGRDAALVFSRKSGKPLGEPLSGFFTVKGYRQGFLLTSLSQTGTLAEEQWVL GHEQADQQNVASLAADVRRLYFQDYLRQWDALLADIDFVPITSVAQAADVLRVISGPTSP LKKLLVAVAKETDLQQDERLLAAQGAPAGGSVDKLKERLGSLLGQEQATQDAPQASDDPI TAHFAELNSIVNKNEGEPAAIDGLLADMNALYVQVSAMVGASGDALLGEAKNQASAAATR VSLNAERQPPLVQGLVKSVVNSTTNSMMGGVRNQLNAAWTSEVVNIYRQSLAGRYPMSPG SARDATLDDFGQFFGVGGVMDNYFRKYLQPYVDTSTPTWRWQPGAAQKLGIAPGVLQTFQ RAATIRDAFFRSGGTQPMVRFELKPVAMDSTITQFLLDLDGQQLSYDHGPSRPTAMQWPN PGSIGVVRISIMPPSANGRSGITLDGPWAWFRLLEQSDLTAGNSPDRFNLRLRVDGASAS YELRANSAFNPFKSRVLSGFSLPERL NT seq 3501 nt NT seq  +upstreamnt  +downstreamnt gtgaaggcgtttttcagttttatgacccgctgggtcatcccattgctggggctgatcgcc ctgagcctgatcatctggttcgtgggcccgctgctggagtggctggtgcccgaaggccgg cgctgggcgttgatcatcctggtgtttgcggtgtggatcgcctaccgggtgtttcgcatc atccaggcccgccgtcaggccgccgaagtcatgcgcagcctggccgcgcaaacgccaccc gacccgaccagcatcgccaccgccgaagaactcgaaaccttgcgccagcgcatggacgaa gccctggccctgctcaagaaagccaaactgggcggtgacgaacggcgcaacctctacgaa ctgccgtggtacgtgatcatcggcccgccgggttcgggcaagaccaccgcgctggtcaac tccgggctgcatttccccctggccgcgcaactgggcgccggggcggtacgcggcgtgggc ggtacgcgcaattgcgattggtggttcaccgaccaggccgtcctgctcgacaccgccggc cgctacaccacccaggacagcgacgccaccgtcgacaaggccgcgtggctgggcttcctt gggctgttgaaaaaacagcgggcccgtcgtccgattgacggtgcgttcatcgccatcagc ctgtccgacctgctgctgggcagcgacgccgagcgcgccgcccatgccgccgcgatacgg ctgcggatccaggagctgtacacccaattgggcgtgcgcttcccgatctacctgatgctc accaagctcgacctggtgcccgggttcatggagtatttcgatacactgagcaaggaagag cgcgcccaggtctggggcatgaccttcgccctggatgatggcaagagcaacgacagcccg ctggcgcacctgcaaagcgaattcaccggccttgagcaacgcctcaacgaccgcctggtg gaacgcttgcagcaagagcgcgacccggcgcggcgcgatctgatctatggcttcccgcag cagttcggcgccttgaaagattgcctgcaaagcttcctcgagggcgtgttcaaacccaac gccttcgaagagcgggtgttgctgcgcggtgtgtatttcaccagcggcacccaggaaggc agcccgatcgatcgcctgatcggttccatggcccagagcatgaacctggaccgtcagcac ctggcgcgccagaccggcaccgggcgcagttacttcatcgaaaaactcttcaccgccgtg gccttcgccgagcgcgggttggtgggcgtcgacccgaaagtcgagcgtcggcgcaagtgg atcgcccgcggggtactggcctccaccgtggccgtggtgctggtggtcgggacgttgtgg tgggtcagctaccgcgccaaccaggcgtacatcacccaggtcgaccaaaaggtcgcgcca ctgggccagaccgtgcagaacctcagcccggcacaacgggatgtgctcgcggtattgccg ttgctcaacgccgtgaagcacctggccgacgacgctcccgactgggccgaaggcctgggc ctgtaccagggcgacatgctcgaagccgagtccggcagcgtctatcgcaagttgctgatc gcggtgttcgcgcctcgcctgctgacgcgggtcgaagaacaactgcacggcggcggcaat tcggatttcctctacgaaggtttgaaggcctacctgatgctcgccgacaccgagcactac gatgccgacttcatcaaggcctggatcgccctggattgggatcgcagcctgccccgtgac ctgccggccgagcaacgcctggcgttgagcgagcatttgcaggcgttgttcgagcgccgt ccgccaaccgcgcgcctggacccgcgcctgatcgaagacctgcgccggcaattgcagcaa ttgcccgtggcccagcgcgtctatgaccgcatcaagcggcagaaactgcccgagggcgta ccggacttccgcatcaatgaagcggccgggcgtgacgccgcgctggtgttcagtcgcaag agcggcaagccgttgggcgaacccctgagcgggttcttcaccgtcaagggctaccgccaa ggcttcttgctcaccagcctgagccagaccggcaccctggctgaagagcaatgggtgctg ggccatgaacaggccgatcagcagaacgtcgccagcctggccgccgacgtccgtcgcctg tacttccaggactacctgcgccaatgggacgccttgctggccgatatcgacttcgtgccg atcaccagcgtggcccaggccgccgatgtgctgcgggtgatttccgggccgacctcgccg ttgaaaaaactgctggtggcggtggccaaggaaaccgacctgcaacaggacgaacgcctg ctggccgcccaaggcgcgccggcgggaggcagtgtggacaagctcaaggagcgcctgggc agcttgctcggccaggagcaggcgacgcaagacgcaccgcaggccagcgatgatccgatc accgcgcacttcgccgagctcaacagcatcgtcaataaaaacgaaggcgaaccggcagcc atcgatggcctcttggccgacatgaacgccttgtacgtgcaggtcagcgccatggtcggt gccagcggcgacgccttgctcggcgaagccaagaaccaggccagcgccgccgccacccgg gtcagcctcaacgctgagcgccagccgccgttggtgcagggcctggtcaagtcggtggtc aactccaccaccaacagcatgatgggcggggtgcgcaatcaactgaacgccgcctggacc agcgaagtggtgaacatctaccgccagtccctggccgggcgttatccgatgtcgccgggc agtgcgcgggacgcgaccctcgatgacttcggtcagttcttcggggttggcggggtgatg gacaactacttccgcaaatacctgcaaccctacgtcgacacctccacaccgacctggcgc tggcagccgggcgcggcgcagaagctcggcattgccccgggtgtgctgcaaaccttccag cgggcggcgaccatccgcgatgcgttcttccgttccggcggcactcagccgatggtgcgc ttcgagctcaaaccggtggcgatggattcgaccatcacccagttcctgctcgaccttgac ggccagcagttgagctacgaccacggcccgagccgtccgaccgccatgcaatggccgaac ccgggcagcatcggcgtggtgcggatctcgatcatgccgccgtccgccaacggtcgctcc ggcatcaccctggatgggccatgggcctggttccggctgctggagcaatcggacctgacc gccggcaactcgccggatcgcttcaacctgcggctgcgagtcgatggcgccagcgcttct tacgaactgcgggccaacagcgccttcaacccgttcaagagccgagtgctcagcggcttc agcctgccggagcggctatga

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