Pseudomonas brassicacearum DF41: CD58_29070
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Entry
CD58_29070 CDS
T03174
Name
(GenBank) EvpB family type VI secretion protein
KO
K11900
type VI secretion system protein ImpC
Organism
pbc
Pseudomonas brassicacearum DF41
Pathway
pbc02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pbc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
CD58_29070
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pbc02044
]
CD58_29070
Secretion system [BR:
pbc02044
]
Type VI secretion system
Imp/Vas secretion system core components
CD58_29070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VipB
VipB_2
BMFP
Motif
Other DBs
NCBI-ProteinID:
AHL36681
LinkDB
All DBs
Position
6476971..6478467
Genome browser
AA seq
498 aa
AA seq
DB search
MTESVRENQSQPLGTAEVPSEFASLLMQEFKPKTERAREAVETAVRTLAEQALAQTDLVS
NDAIKSIESIIAAIDAKLTAQVNQVIHHPDFQQLESAWRGLHYLVNNTESDEQLKIRVLN
ISKTDLHKTLKKFKGTAWDQSPIFKKMYEEEYGQFGGEPYGCLVGDYYFDQSPPDVELLG
ELSKVCAAMHSPFIAAASPTVMGMGSWQELSNPRDLTKIFTTPEYAGWRSLRESEDSRYI
GLTMPRFLARLPYGAKTDPVEAFAFEENTDGADSSKYTWANAAYAMAVNINRSFKHFGWC
SRIRGVESGGEVENLPAHTFPTDDGGVDMKCPTEIAISDRREAELAKNGFMPLLHKKNTD
FAAFIGAQSLQKPAEYDDPDATANANLAARLPYLFATCRFAHYLKCIVRDKIGSFKERDE
MQRWLQDWILNYVDGDPAHSTETTKAQHPLAAAEVIVEEVEGNPGYYSSKFYLRPHYQLE
GLTVSLRLVSKLPSAKGA
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaatcagtacgtgaaaatcagtcccagcccctgggcactgccgaagtacccagc
gagttcgcctcgctgctgatgcaagaattcaaacccaagaccgagcgcgctcgcgaagcc
gtcgagacggccgtgcgtacgctggccgagcaggccctggcgcagactgacctggtgtcc
aacgacgccatcaagtcgatcgaatcgatcatcgccgccattgacgccaagctcaccgcc
caggtcaaccaggtcatccaccaccccgacttccagcaactggaaagcgcctggcgtggc
ctgcactacctggtcaacaacaccgagagcgacgagcagctcaagatccgcgtgctcaac
atctccaagaccgacctgcacaagaccctgaagaaattcaagggcaccgcgtgggaccaa
agcccgatcttcaagaagatgtacgaagaagaatacggccagttcggcggcgaaccttac
ggttgcctggtgggcgactactacttcgaccagtcgccaccggatgtcgagttgctgggc
gagctgtcgaaagtctgcgcggccatgcactccccgttcatcgcagcggcatcgccgacc
gtgatgggcatgggctcgtggcaggaactgtcgaacccgcgcgacctgaccaaaatcttc
accaccccggaatatgccggctggcgttcgctgcgtgaatcggaagactcgcgctacatc
ggcctgaccatgccgcgcttcctggcgcgcctgccgtacggcgccaagaccgacccggtg
gaagccttcgccttcgaagagaacaccgacggcgccgacagctccaagtacacctgggcc
aacgccgcctacgcgatggccgtgaacatcaaccgttcgttcaaacacttcggctggtgc
tcgcgcatccgtggcgttgaatcgggcggcgaagtggaaaacctgccggcccacacgttc
ccgaccgacgacggtggcgtggacatgaagtgcccgaccgaaatcgccatttcggaccgc
cgtgaagcggaactggcgaagaacggtttcatgccgctgctgcacaagaaaaacaccgac
ttcgccgccttcatcggcgcccagtcgttgcagaaaccggccgaatacgacgacccggac
gccaccgccaacgccaacctggccgcgcgcctgccgtacctgttcgccacctgccgtttc
gcccattacctgaagtgcatcgtgcgcgacaagatcggctccttcaaagaacgggacgag
atgcagcgctggttgcaggactggatcctcaactacgtcgacggtgacccggcgcactcc
accgagaccaccaaggcccagcacccattggcagcggccgaagtgatcgtcgaagaagtc
gaaggcaacccggggtactacagctccaagttctacctgcgtccgcactaccagctcgaa
gggctgaccgtgtcgctgcgactggtatcgaaactgccgtcggccaagggcgcataa
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