KEGG   Pseudomonas brassicacearum DF41: CD58_29075
Entry
CD58_29075        CDS       T03174                                 
Name
(GenBank) Hcp1 family type VI secretion system effector
  KO
K11903  type VI secretion system secreted protein Hcp
Organism
pbc  Pseudomonas brassicacearum DF41
Pathway
pbc02025  Biofilm formation - Pseudomonas aeruginosa
pbc03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pbc00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    CD58_29075
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    CD58_29075
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pbc02044]
    CD58_29075
Secretion system [BR:pbc02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   CD58_29075
SSDB
Motif
Pfam: T6SS_HCP
Other DBs
NCBI-ProteinID: AHL36682
UniProt: W8PZR6
LinkDB
Position
6478688..6479176
AA seq 162 aa
MAVDIFIKIGDIKGESMDKAHKDEIDVLNWSWGMSQSGNMHVGSGGGAGKVNVQDLSLTK
FVDKASPNLMMHCASGKHIDKVKLTVRKAGGESQVEYMIINLEEVLVTSLSTGGSGGDDR
LTENVTLNFAKVLVDYQPQKADGTKEGGPVKFGWNIRQNVKV
NT seq 489 nt   +upstreamnt  +downstreamnt
atggctgttgatattttcatcaagattggcgacatcaagggcgagtccatggacaaggcc
cacaaggacgagatcgacgtcctgaactggagctggggcatgtcccagtccggcaacatg
cacgtgggcagcggcggtggtgccggcaaggtcaacgtccaggacctgtcgctgaccaag
ttcgtcgacaaggcttcgccgaacctgatgatgcactgcgccagcggcaagcacatcgac
aaggtcaagctgaccgtgcgcaaggccggcggtgaaagccaggtcgagtacatgatcatc
aacctggaagaagtgctggtcacttccctgagcaccggtggctcgggtggcgatgatcgc
ctgactgaaaacgtcaccctgaacttcgccaaggtgctggtggactaccagccacagaaa
gccgacggcaccaaggaaggcggtccggtcaagttcggctggaacatccgtcagaacgtc
aaggtgtaa

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