Pseudomonas brassicacearum DF41: CD58_29535
Help
Entry
CD58_29535 CDS
T03174
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pbc
Pseudomonas brassicacearum DF41
Pathway
pbc03420
Nucleotide excision repair
pbc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pbc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CD58_29535 (uvrD)
03430 Mismatch repair
CD58_29535 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbc03400
]
CD58_29535 (uvrD)
Enzymes [BR:
pbc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CD58_29535 (uvrD)
DNA repair and recombination proteins [BR:
pbc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CD58_29535 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
CD58_29535 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
Viral_helicase1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AHL36760
LinkDB
All DBs
Position
6588516..6590699
Genome browser
AA seq
727 aa
AA seq
DB search
MRDDLSLLLNSLNDAQRQAVAASVGRQLVLAGAGSGKTRVLVHRIAWLIQVENASPHSIL
SVTFTNKAAAEMRHRIEQLMGINPAGMWVGTFHGLAHRLLRAHWQEAGLSQTFQILDSDD
QQRLVKRVIRELGLDEQRWPARQAQWFINGQKDEGLRPQHIQASGDLFLATMRSIYEAYE
AACQRAGVIDFSELLLRALDLWRDHPGLLAHYQKRFRHVLVDEFQDTNAVQYAWLRLLAK
GGDSLMVVGDDDQSIYGWRGAKIENIHQYSADFPDAEVIRLEQNYRSTAGILKAANALIA
NNTGRLGKELWTDGGEGEAINLYAAFNEHDEARYVVETIESALKTGLARSDIAILYRSNA
QSRVLEEALLRERIPYRIYGGQRFFERAEIKNAMAYLRLLEGRGNDAALERVINVPTRGI
GEKTVEAIRDHARHSHVSMWEAMRQLVANKGVTGRAAGALKAFMDLIEDLAAKCGEMPLH
LMTQTVIEQSGLIAYHEAEKGEKGQARVENLEELVSAARNFENTEEDADLTPLSAFLGHA
SLEAGDTQADEHEDSIQLMTLHSAKGLEFPYVFLVGMEEGLFPHKMSLEEPGRLEEERRL
AYVGITRAMQNLVLTYAETRRLYGSETYNKVSRFVREVPKGLIQEVRLSNSVSRPFGGGQ
QQSTSSLFGGSDIPETGFSLGQTVRHSVFGDGVILNFEGAGAQARVQVNFSEGSKWLMLG
YAKLEAI
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgatgatctctcccttctgctgaactccctcaacgatgcccaacgccaggccgta
gccgcctccgtgggtcgtcagttggtcctggccggtgccggctccggtaaaacccgagtg
ctggtgcaccgtatcgcctggttgatccaggtcgagaacgcctcgccccattcgatcctg
tcggtgactttcaccaacaaggccgctgccgaaatgcgtcatcgcatcgagcagttgatg
ggcatcaacccggccggcatgtgggtcggtacgttccacggcctggcgcatcgcctgctg
cgggcgcactggcaggaagccggcctgagccagaccttccaaatcctggacagcgatgac
cagcagcggctggtcaagcgggtgatccgcgagctgggcctggacgagcagcgctggcct
gcccgtcaggcccaatggttcatcaacggccagaaagacgaaggcctgcgcccacaacac
atccaggccagcggcgacctgttcctggccaccatgcgcagcatctacgaagcctacgag
gcggcgtgccagcgtgccggggtcatcgacttttccgagctgttgctacgggcgttggac
ctgtggcgcgatcacccaggcctgctggctcactatcaaaagcgcttccggcatgtcttg
gtggacgagttccaggacaccaacgccgtgcaatacgcctggttgcgcctgttggccaag
ggcggcgacagcctgatggtcgtgggcgatgacgaccagtcgatctacggctggcgcggc
gcaaaaatcgagaacattcaccagtattcagcggactttcctgatgccgaagtcatccgc
ctggagcagaactaccgctctaccgccggcatcctcaaggccgccaacgccctgatcgcc
aacaataccgggcgtcttggcaaggaattgtggaccgatggcggcgaaggcgaagcgatc
aatctctacgcggccttcaacgaacacgatgaagcccgctacgtggtggaaaccatcgag
agcgcgctgaaaaccggcctggcccgcagcgacatcgccatcctgtatcgctccaacgcc
cagtcgcgggtactggaagaagccttgttgcgcgaacggatcccgtaccgcatctatggc
ggccagcgctttttcgagcgcgccgaaatcaagaacgccatggcctatctccgcctgctc
gaagggcgcggtaacgacgccgccctggaacgggtgatcaacgtaccgacacggggcatc
ggcgagaagaccgtcgaagcgattcgcgatcacgcacgccatagccatgtgtcgatgtgg
gaagccatgcgtcaattggtggccaataaaggcgtgaccgggcgtgccgcgggtgccctg
aaggccttcatggacctgatcgaagacctggccgccaagtgcggggagatgccgctgcac
ttgatgacccagacggtcatcgagcagtccggcctgatcgcctatcacgaagcggaaaaa
ggcgagaagggccaggcacgggtagaaaaccttgaggaactggtcagcgccgcacgcaac
ttcgagaacaccgaagaagacgcagacctgacgccgctgtcggcattcctcggtcacgct
tccctggaggccggcgacacccaggccgacgagcatgaagacagcatccaactgatgacc
ttgcacagcgccaagggcctggaattcccctacgtgttcctcgtaggcatggaagaaggc
ctgtttccccacaagatgagcctggaagaaccgggacgcctggaagaggaacgccgcctg
gcctatgtcggcatcactcgcgccatgcagaacctggtgctgacttacgccgaaacccga
cgtttgtatggcagcgagacctacaacaaggtgtcgcgcttcgtacgcgaagtgccgaag
ggcctgattcaggaagtacgactgtccaacagcgtcagccgtccgttcggcggtggccag
cagcaaagcaccagcagcctgttcggcggcagcgatatcccggaaaccggcttcagcctc
ggccagaccgttcggcattcggtattcggtgacggtgtgatcctcaacttcgaaggcgct
ggcgcccaggcccgggtgcaggtgaacttcagcgaaggcagcaagtggctgatgctgggg
tatgccaagctcgaggcgatctag
DBGET
integrated database retrieval system
