Paenibacillus borealis: PBOR_00425
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Entry
PBOR_00425 CDS
T03324
Name
(GenBank) seryl-tRNA synthetase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
pbd
Paenibacillus borealis
Pathway
pbd00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pbd00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PBOR_00425
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pbd01007
]
PBOR_00425
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pbd03016
]
PBOR_00425
Enzymes [BR:
pbd01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
PBOR_00425
Amino acid related enzymes [BR:
pbd01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
PBOR_00425
Transfer RNA biogenesis [BR:
pbd03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
PBOR_00425
Prokaryotic type
PBOR_00425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
DUF7307
DUF4094
SHE3
DUF7310
KIF21A
CCDC113_CCDC96_CC
Laminin_I
DUF7568
SIKE
Motif
Other DBs
NCBI-ProteinID:
AIQ55613
UniProt:
A0A089L8X8
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All DBs
Position
89932..91221
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AA seq
429 aa
AA seq
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MLDVKVLRSDYARVEEALNKRGKSLDLIAGFPQLDLRRRELLQETEGLKNRRNTVSGDVA
KKKKNGEPADDLIAEMRTVSDRIKELDDEVRELETKIDELTMSIPNIPHESVPVGKSEDD
NVEVRRWSQPREFGFTPKSHWELAQQLDIIDFEAAAKVTGSRFAFYKGLGARLERALINF
MMDLHSGEHNYEEMLPPYIVNKDSLYGTGQLPKFEEDLFKLRDTEYYLIPTAEVPVTNYY
REEILTAGDLPKYHVAYSSCFRSEAGSAGRDTRGLIRQHQFNKVELVKLASPETSYEELE
KMTADAERVLQLLGLPYRVLLLCTADMGFTSAKTYDLEVWLPESGMYREISSCSNTEDFQ
ARRANIRFRKEAKSKPEFVHTLNGSALAVGRTVAAILENYQQEDGSVLIPECLQPYMRNV
KSISAQTAQ
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
gtgttagatgttaaagtattgcgtagtgattatgccagagtagaagaggcgcttaataaa
agagggaaatcgctcgatttgattgccggcttcccgcagctggatctgcgccgccgtgag
ctgcttcaggaaacagaggggcttaagaaccgccggaataccgtatccggagatgtggcc
aagaagaagaaaaatggggaaccggctgatgatttgatcgctgaaatgcgtacggtttcc
gaccggatcaaagaactagacgatgaagtgcgcgaactcgaaactaagatcgatgaactg
accatgagcatcccgaacattccgcatgaatcggtgccggttggcaaatctgaggatgac
aatgttgaagtacgccgctggtcgcagcccagagaattcggattcaccccgaaatcacac
tgggagctggcgcagcagctggatattattgattttgaagcagcagccaaggttacaggt
tcccggtttgccttctacaaagggctgggagcaagacttgagcgtgcgctaatcaatttc
atgatggatctgcacagtggagagcataactatgaagaaatgctgccgccgtatatcgtc
aacaaggatagcctgtatggaacaggacagctgccgaagttcgaagaggatttgttcaag
ctgcgtgatacagaatattatctgattcctacagcagaagtacctgtgactaactactac
cgtgaagagattctgacagctggtgatctgccgaagtaccatgtagcctatagctcctgc
ttccgttctgaagccggatctgcgggacgtgatacccgcggtctgatccgccagcatcag
ttcaataaggtggagcttgtgaagcttgccagtccggagacctcctatgaggagctggag
aagatgacagccgatgctgaacgggtgctgcagcttctgggactgccttatcgcgtcctg
ctgctgtgtacggcagatatgggcttcacctccgcgaagacgtatgaccttgaggtatgg
ctgccggagagcggaatgtaccgcgaaatttcctcctgctccaacacagaggatttccag
gcccgccgtgctaatatccgcttccgcaaagaggccaagtccaagccggagttcgtgcat
acgctgaatggttctgcgctggccgttggccgtacagtagctgctattctggagaattac
cagcaggaagacggcagtgttctgattcccgagtgcctgcagccgtatatgcgtaacgtg
aaatccataagtgcacaaactgcccaataa
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