Paenibacillus borealis: PBOR_01025
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Entry
PBOR_01025 CDS
T03324
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pbd
Paenibacillus borealis
Pathway
pbd00040
Pentose and glucuronate interconversions
pbd01100
Metabolic pathways
pbd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pbd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
PBOR_01025
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PBOR_01025
Enzymes [BR:
pbd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
PBOR_01025
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Gene cluster
GFIT
Motif
Pfam:
CBM77
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
AIQ55707
UniProt:
A0A089L4J7
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Position
205695..207875
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AA seq
726 aa
AA seq
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MKRTVAKVTSIVLLFSLALSLIAGGWGTTVAHAAGLTITGSGGGNEAAYVEWAPVSNATG
YNVYVKAASAADTQYQQINNELIRKYASYWRADAVGLAAGSYVMKVEAVSSGAVTANAVS
GTLAVAPYDRSGFAFSANSQFGTGSGAYNDNGTLKSGAQVLYITSQNAQTVTLGVKTSSS
GTVQTGVGLGGILTLRQKGYDTTPLAIRIIGKVTASDLSGQLNSSGYLEVKGKNNYTEMN
ITIEGIGKDAYAYGWGMLLRYTGNVEVRNLGVMLFPDDGISMDTGNANVWVHNNDIFYGS
AGSDADQVKGDGSTDLKKGSTYITISYNHYFDSGKAALVGLSESAEFFVTFHHNWFDHSD
SRHPRIRVASVHVYNNFYDGVSKYGVGVTTGASAFVESNVFRNTKDPMLSSLQGTDAIGE
EGTFSGENGGMIKAYNNSVTGAASLIYANSSTGTAPANATSFDAYLASSRSEAVPSSYKA
LVGGTAYNNFDTTVNTGVSAAAVDSVSVVEQTVRAKAGRLSGGDFSWTFNNSVDDASYAI
NAALMSAIQGYTTGLVSVGGNSNPSGPTPTPSATTAPTATPTATPAPTATPVPTATTVPT
ATPVPTATPVPTATPTTGAIVHNFTTSGITSSFFSISGNLSTSKGTVVYGGLTLTQCLKI
ESATSIGFTAAKASTLTLVFNSEGTKVKVDGTSYTITNGIATVSLAAGAHTITKDSTANL
YYMKVE
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaggacagttgcaaaggtaaccagtatagttctattattttctcttgcactatct
ctgatcgccggcggatggggaactacggtagcacacgctgcgggtcttacgataacgggc
agtggaggcggaaatgaagctgcttatgtggagtgggcaccagtaagtaatgcaacggga
tataatgtatatgttaaagcagcgagcgcagcggacacccagtatcagcagattaataac
gaattgatccgcaaatacgcgtcttattggagagctgatgccgtagggcttgcagccgga
agttatgtcatgaaggttgaggctgtatcgtcaggtgcagtgacggcaaacgctgtctca
ggaacgctggctgtagcgccgtatgaccggtctggatttgctttttcagccaattcgcaa
tttggtacaggctccggtgcttataatgataatggaacgctgaagagcggggcacaggta
ttgtatatcacctcgcagaatgcgcaaaccgtaacgctcggtgtgaaaaccagcagctcg
ggtacagtacagaccggggttggtctgggcggaattctgacactgagacaaaaaggctac
gatacaacgccgctggctatccggattatcgggaaagttacagcctctgatctgagcgga
cagctcaacagcagtggttatcttgaagtcaaaggtaaaaacaattatacggaaatgaat
attaccatcgagggtatcgggaaagatgcgtatgcctacggctggggaatgctgcttaga
tatacggggaatgtcgaagtcagaaatctgggcgtgatgttattccctgacgacggtatt
tcaatggatacaggcaatgcaaatgtatgggtgcataataatgatattttctacggatct
gctggaagtgacgcggaccaggttaagggtgacggttctacggacctcaagaaaggctca
acgtatatcaccatctcgtacaaccactattttgattccggaaaagcagctctggtcgga
cttagtgagtctgccgaattctttgtcaccttccaccataactggttcgatcattcggac
tcccgtcatccgcggatcagagtagcttctgttcatgtctataataacttctatgatggg
gtctccaaatatggcgtcggcgttacaaccggagcttcggcttttgtagaatcgaatgtg
tttagaaatactaaagatccaatgcttagttccctgcaaggcacggatgctataggggaa
gaaggtacgttctcaggcgaaaatggtggtatgatcaaagcctacaacaacagtgttact
ggtgcggcaagtctgatctatgccaactccagtaccggaaccgctccggcgaatgccacc
tccttcgatgcatacttagcttcgtcgagaagtgaagccgttccaagctcttacaaagct
ctagtgggtgggacagcgtataacaacttcgataccactgtgaatactggagtaagtgca
gctgccgttgatagtgtaagtgtggttgaacagacggttagggcaaaagcaggccgcctg
agcgggggagacttcagctggacatttaataattcggtggatgacgcatcgtatgcaatt
aacgcagcgctgatgtctgctatccagggctacaccacggggcttgtatctgtagggggc
aactccaatccgtcaggaccgactccgactccatcagcaacaacggcaccgactgcaacc
ccaacagcaaccccggcgccaacggcaactccggtgccgactgcaacgactgtaccaaca
gcaacacctgtaccaacggcaactccggtgccgactgcaacgcccactactggggcaatt
gttcataacttcactacatccggaataacgagcagcttcttctctatttccgggaatctc
tccacgagtaaaggaactgtagtatatggcggtctgaccttaacccaatgtctgaagatc
gagagcgcaaccagcattggattcacagcagccaaagcctcgactttaacattagtgttc
aactccgaaggaaccaaagttaaagtagatggaaccagctatactatcacgaatggtatt
gccacggtctctctcgcagcgggtgcgcatacgattacgaaggatagtactgcgaatttg
tattatatgaaggtggagtag
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