Paenibacillus borealis: PBOR_01725
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Entry
PBOR_01725 CDS
T03324
Name
(GenBank) ATP-dependent DNA helicase UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pbd
Paenibacillus borealis
Pathway
pbd03420
Nucleotide excision repair
pbd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pbd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PBOR_01725
03430 Mismatch repair
PBOR_01725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbd03400
]
PBOR_01725
Enzymes [BR:
pbd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PBOR_01725
DNA repair and recombination proteins [BR:
pbd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PBOR_01725
MMR (mismatch excision repair)
Other MMR factors
PBOR_01725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
YdjO
AAA_12
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AIQ55826
UniProt:
A0A089L2X7
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All DBs
Position
complement(378279..380615)
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AA seq
778 aa
AA seq
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MNKLLFHNIPLGATGEKIPQAKVASARTSRETVKPGDSDAAYFRRLEEGGILLNPPQISA
VRHHLGPLLTLAGAGSGKTSVLICRTGYLLSVRGIAPGRLLLLTFSSKAAAEMRERIALL
PGVDAGDAARLQARTFHSFFLYFLRRQGLRQDIFHETRRQHILLKQIMRQLGLPKDAYPP
ENLLTLLSSCKMNMGLPQDMPETTEAEKEMKAILALYEQWKTDNFKIDFDDVLLIAYRML
REQPALLLELQQKYQYVMVDEFQDTNALQYELVKMIAHPQDNLMVVGDDDQTIYSFNGAR
SEFILEFEKLYPNAKVITLDINYRSGPAIIGLGNGIIRHNSRRRAKTLQAAKSSGNPPRY
LRPQTADEEAEQIVEHIEREIESGAREYRDYALLYRATSSNRAILELLLMHDIPYVDYGE
GQLLYEHWLISPVLDHLRLSVNRRNFAAMENILPTLYMSREKGMDHIRRMEAVQAKQGPL
IHLLSMPGMEDFKGVKLRERLDLIRGLSGLTPVQAIRQIRTVFYDYFIEANERHQATLHR
ETLKEMLDELEASAERFGTIPLFLEFIDNVTERNELSRQPGLKEQGNRIALMTIHKSKGL
EFPVVFLIGASEGILPHSSALEEGRLKDRKPGKASVTVVSSSAARAAAEAGIALLEEERR
LAYVAVTRAREELFISSPARHRGKKAEVSRFMLSAFRAAAPPQATAPAAGNSSTIVRSSY
TSGSASARTHTIPVWSCTGKACPGWTRMKAGGAEDHLASKPCPLCKSPMQKGTRDVPV
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagcttttatttcataatataccgctgggcgctaccggcgagaaaatcccccag
gcgaaggttgcctccgcccgtacgagcagggagaccgtgaagcccggggacagcgatgcg
gcttacttccgcaggctggaggaaggcggcattctgctcaatcctccgcaaatctcagcg
gtgcggcatcacctcgggccgctgctgacactggcgggagcgggctccggcaaaacctcg
gtgctgatctgcagaaccgggtatttgctgtctgtgcgcggcatcgcccccggccggctg
ctgctgctgaccttctccagcaaggcagcggcagagatgcgcgagcggattgcactgctg
ccgggtgtggatgccggtgatgccgcccgtctgcaggcccgcacgttccactcgttcttc
ctttatttcctgcgccggcaggggctgcggcaggatattttccatgaaacccggcgccag
cacattctgctgaagcagatcatgcgtcagctggggctgccgaaggatgcctatcctcca
gagaatctgctcaccctgctctcctcctgcaagatgaacatgggcttgcctcaggatatg
ccggaaacgacggaagcggagaaggaaatgaaggccattcttgccctgtacgagcagtgg
aagacggataatttcaaaatcgatttcgacgatgtgctgctgattgcctaccggatgctc
cgggagcagccggcacttctgctggagctgcagcagaaataccaatatgtaatggtcgac
gaattccaggatacgaatgcgctgcaatatgagctggtcaaaatgatcgcccatccgcag
gacaacctgatggtggtcggagatgatgatcagaccatctattccttcaacggggcgcgc
agcgagttcatcctggagttcgagaagctgtatccaaacgccaaagtgatcaccctcgat
atcaattaccgctcaggacctgccattatcgggctcgggaacgggattatccgccacaat
tcacggcgccgggccaagacgctgcaagctgccaaaagcagcggcaatccgccccgctac
cttcgtccgcagacggcggacgaagaggccgagcaaattgtggagcatatcgagcgtgag
atcgagagcggagcgcgggaataccgcgattacgccctgctgtaccgcgccaccagcagc
aaccgggccatcctggagctgctgctgatgcacgacatcccttatgtggactacggcgaa
ggccagctgctctacgagcattggctgatctcccctgtgctggatcatctgcgcctgtcc
gttaaccgccggaacttcgccgcgatggagaatattctgccgaccctctacatgagccgg
gaaaaagggatggaccatatccgccgcatggaggcggtgcaggcgaagcagggcccgctg
attcaccttctgtccatgccgggcatggaggatttcaaaggcgtcaagctgcgcgagcgg
ctggatctgatccgcgggctgagcgggctgacgcccgtgcaggccatccgccagatccgg
actgtcttctatgattatttcattgaagccaatgaacggcatcaggccaccctgcaccgg
gagacgcttaaggaaatgctcgatgagctggaggcgtccgctgagcggttcggcacgatt
ccgctgttcctcgagttcattgataacgtaaccgagcgcaacgagctgagccgccagccg
gggcttaaggagcaaggcaaccggattgccctgatgaccatccataaatccaagggtctg
gagttccccgttgtcttccttatcggagcttctgagggcattctgccgcatagctccgca
ctggaggagggccggctgaaggaccgtaagccggggaaggcatccgtaaccgtggtcagc
agttctgccgccagagccgcagctgaggcaggaatagcgctactagaagaggaacgcagg
ctcgcctatgtagccgttacccgggcccgcgaggagctattcatcagctcacccgcaagg
caccggggcaagaaggcagaggtctcacgcttcatgctctccgccttccgcgctgcggcc
ccgccgcaggcaactgcaccggccgccggaaacagcagcactatagtgcgcagcagttat
acgtccggctccgcctcagcaaggacgcatacaattcccgtctggagctgtaccggcaag
gcctgcccgggctggacccggatgaaggcgggcggagccgaggatcaccttgcctcgaag
ccctgtccgctgtgcaaatcgccgatgcaaaaaggcacccgcgacgtccctgtataa
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