Paenibacillus borealis: PBOR_05965
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Entry
PBOR_05965 CDS
T03324
Symbol
groEL
Name
(GenBank) molecular chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pbd
Paenibacillus borealis
Pathway
pbd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pbd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PBOR_05965 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbd03019
]
PBOR_05965 (groEL)
03110 Chaperones and folding catalysts [BR:
pbd03110
]
PBOR_05965 (groEL)
03029 Mitochondrial biogenesis [BR:
pbd03029
]
PBOR_05965 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pbd04147
]
PBOR_05965 (groEL)
Enzymes [BR:
pbd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
PBOR_05965 (groEL)
Messenger RNA biogenesis [BR:
pbd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
PBOR_05965 (groEL)
Chaperones and folding catalysts [BR:
pbd03110
]
Heat shock proteins
HSP60 / Chaperonin
PBOR_05965 (groEL)
Mitochondrial biogenesis [BR:
pbd03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
PBOR_05965 (groEL)
Exosome [BR:
pbd04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PBOR_05965 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
PBOR_05965 (groEL)
Exosomal proteins of breast cancer cells
PBOR_05965 (groEL)
Exosomal proteins of colorectal cancer cells
PBOR_05965 (groEL)
Exosomal proteins of bladder cancer cells
PBOR_05965 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
NNH2
Motif
Other DBs
NCBI-ProteinID:
AIQ56535
UniProt:
A0A089L8W3
LinkDB
All DBs
Position
1354743..1356371
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AA seq
542 aa
AA seq
DB search
MAKEIKFSEDARRAMLRGVDALANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIE
LEDAFENMGAQLVKEVATKTNDVAGDGTTTATVLAQAMIREGLKNVTAGANPMVMRKGID
KAVKAAVLELQRISKPIEDSQSIAQVAAISAADEEVGQLIAEAMEKVGKDGVITVEESRG
FLTELEVVEGMQFDRGYISPYMITDTDKMEAVLENPYILITDKKISSTQEILPLLEKIVQ
QARPLVIIAEDIEGEAQAMLIVNKLRGTFNAVAVKAPGFGDRREAMLQDIAALTGGQVIT
EKLGLDLKSTSIEQLGNARQVRVTKENTTIVDGSGDKADINARVSQIRSQLEETTSEFDK
EKLQERLAKLAGGVAVVKVGAATETELKERKLRIEDALNATRAAVEEGIVSGGGTALVNV
YAAVAAVVAEGDERTGVNLVLRALEEPVRTIAANAGQEGSVIVDRLKKEAVGIGYNAATD
EWVNMFEAGIVDPAKVTRYALQNAASVAAMFLTTEAVIADKPEPEKGGMPDMGGMGGMGG
MM
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagaaattaaattcagtgaagatgcacgccgtgcaatgctgcgcggggttgat
gctttggcaaatgcggttaaagttacactcggacctaaaggccgcaacgtggtgcttgag
aagaaattcggcagcccgctaatcactaatgatggtgttaccatcgccaaagaaatcgag
cttgaagatgcatttgagaacatgggcgcgcagcttgttaaagaagttgctaccaaaact
aacgatgtagccggtgacggtactacaactgcaacagttctggctcaagccatgatccgc
gaaggtctgaagaacgttactgcaggcgctaaccctatggttatgcgtaaaggtatcgac
aaagcggttaaagctgctgttcttgaactgcagagaatttccaagcctatcgaagattcc
cagtctatcgcacaagtagctgctatctctgctgctgacgaagaagtaggccaactgatt
gctgaagctatggaaaaagtcggcaaagacggcgttatcaccgttgaagaatcccgcgga
ttcctgactgagcttgaagtggtagaaggtatgcagttcgaccgcggttacatttccccg
tacatgattacagatacggacaaaatggaagctgttctggagaacccgtacatcctgatc
actgacaagaagatcagcagcactcaggaaattcttcctttgcttgagaagatcgttcaa
caggcgcgtccgctggtgatcatcgctgaagatatcgaaggcgaagctcaggcgatgctg
atcgtgaacaaactgcgcggaacgttcaatgctgtagcggttaaagctcctggattcggc
gaccgccgtgaagctatgctgcaggatatcgctgctctgacaggcggccaagtgatcact
gagaagcttggactggatctgaaaagcacttccatcgagcaactgggtaacgcacgtcaa
gtgcgcgtaaccaaagagaacactacaatcgtagacggaagcggcgacaaggctgacatc
aacgcacgcgtaagccaaatccgttcccagctggaagaaacaacttccgaattcgacaaa
gaaaaactgcaggagcgtctggctaaactggctggcggcgtagccgttgtcaaagtcggt
gctgctactgaaactgaacttaaagagcgcaagctccgcatcgaagatgccctgaacgca
acccgcgctgcggttgaagaaggtatcgtatccggtgggggtacagctcttgtgaacgta
tatgctgctgtagctgctgttgtagctgaaggcgacgaaagaacaggggttaacctcgtg
ctgcgcgcactggaagaacctgtccgcaccatcgctgctaacgcaggccaggaaggttcc
gttatcgtggaccgtctgaaaaaagaagctgtaggtatcggctataacgctgctaccgat
gagtgggtaaatatgttcgaagcgggtatcgttgaccctgccaaggtaacacgttatgct
ctgcagaacgctgcttctgtagctgcaatgttcctgaccactgaagctgttatcgctgac
aagccagaaccggaaaagggcggaatgcctgatatgggcggaatgggcggaatgggcggc
atgatgtaa
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