Paenibacillus borealis: PBOR_07650
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Entry
PBOR_07650 CDS
T03324
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pbd
Paenibacillus borealis
Pathway
pbd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pbd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PBOR_07650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbd03019
]
PBOR_07650
03400 DNA repair and recombination proteins [BR:
pbd03400
]
PBOR_07650
Enzymes [BR:
pbd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PBOR_07650
Messenger RNA biogenesis [BR:
pbd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PBOR_07650
DNA repair and recombination proteins [BR:
pbd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PBOR_07650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
Helicase_C
DEAD
HRDC
RecQ_Zn_bind
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
AIQ56828
UniProt:
A0A089LCG6
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All DBs
Position
1709146..1710972
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AA seq
608 aa
AA seq
DB search
MKMQGSLMEQAQAELQKYYGYPDFREGQKKIVNNLLEGRDTLGILPTGGGKSICYQVPAL
LLPGLTLVVSPLISLMKDQVDALTTAGIPAAYINSTLSGKEVNDRIRAARRGELKLLYVA
PERLELDWFRLEMAGLSISCVAVDEAHCVSQWGHDFRTSYLAVSPFVDELPQRPILAAFT
ATATPEVMEDMVRLLRLRDPGVFMTGLGRDNLAMQVLRGENKREFVLDYTAQHSHQPGIV
YAATRKEVDDLYQRLQAAGIAAGRYHAGMSDQERAESQEGFLYDDIRVMVATNAFGMGID
KSNVRYVIHYNMPKNMEAYVQEAGRAGRDGEPSDCILLFSAQDIMTQKFLIEQNPQDTER
KANEYRKLQQMIDYCYTTRCLRSAQLDYFGENHDDDPCGICSSCTDDRQLVDMTVDAQKI
FSCIHRMRERYGVALVSSVLKGSRNQKVLQYGFEKLPTHGAMSGRSEKEITESINVLISE
GYLALSEGQYPVVRLQPLAAEVLRGQREVHQRVARTLVTSGTRDRSRSRDISPSAVNETV
FEQLRLIRRELAGREHVPSYIIFNDATLREMSVVCPQTEAEMLRVKGVGEVKYRKYGRAF
LEFFQNEM
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgcaaggatcacttatggaacaagcgcaggctgaactgcaaaaatattacggc
taccccgacttccgggaaggccagaagaaaatcgtgaacaatctgctcgaaggccgcgat
acgctgggcattctgcccaccgggggcggtaaatcgatctgttatcaggttccggcactg
ctgctgccggggcttacacttgtcgtatccccgctgatctcactcatgaaggatcaggta
gacgcgctcaccactgcggggattcctgctgcctatatcaatagcacgttgagcggcaag
gaagtaaatgaccgtatccgcgccgcccgccggggtgagctgaagctgctctacgtggca
cccgaacggctggagctggactggttccgcctggagatggcgggtctgtctatctcctgt
gttgccgtcgatgaggcgcactgcgtatcacagtggggccatgatttccgcaccagttat
ctggcggtgtcaccgtttgtggatgagctgccgcaacggccgattctggccgcattcaca
gctaccgctacacctgaggttatggaggatatggtccggctgctgcgtctgcgcgatccg
ggcgtgttcatgaccgggcttggccgtgataacctggccatgcaagtgctgcgcggggag
aacaaacgcgagttcgtgctggactacacggcgcagcattcgcatcagccgggaatcgtc
tatgccgccacccgcaaagaggtggatgatctctatcagcggctgcaggcggcgggaatc
gctgcgggccgctaccatgccggaatgagcgatcaggaaagggccgagagccaggaaggg
ttcctctatgacgatatccgtgtcatggttgccacgaatgcttttgggatggggatcgac
aaatctaacgtccgttatgtcatccactataatatgccgaagaacatggaggcttatgtc
caggaagccggacgtgccgggcgtgacggggagccgagcgattgcatcctgctcttcagt
gcgcaggatatcatgacgcagaagttcctgattgaacagaatccgcaggacacggagcgc
aaagccaatgaataccgcaagctgcagcagatgattgattactgctataccacccgctgt
ctgcgcagtgcacagctggattatttcggcgagaatcatgacgacgatccgtgcggcatc
tgcagctcttgtaccgatgaccgccagctggtggacatgacagtggatgcgcagaagatc
ttctcctgcatccaccgcatgcgtgaacgctacggtgtggcactggtatcctcggtgctg
aagggctcgcgcaaccagaaggtgctgcagtacggcttcgagaagctgccgacccacggg
gcgatgtccggccgcagcgagaaagagattaccgagagcatcaatgtgctgatctcggag
ggttatctggccttgtccgaaggccagtatccggtcgtgcggctgcagccgctggcagcc
gaggtgctgcgcggccagcgcgaggttcaccagcgcgtagcccgcacgcttgtcacctcg
ggcacgcgggaccgcagccgctcgcgcgacatttcgccgtcggccgtcaacgagacggtg
ttcgagcagctgcgcctgatccgccgcgagctcgcggggcgcgagcatgtgccgtcctac
atcatcttcaatgatgcgacgctgcgcgagatgagtgtggtttgtccgcagacggaagcg
gagatgctgagggtgaagggtgtcggcgaagtgaaataccgtaaatacggcagggcattc
ctggagttttttcaaaatgaaatgtaa
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