Paenibacillus borealis: PBOR_11600
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Entry
PBOR_11600 CDS
T03324
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pbd
Paenibacillus borealis
Pathway
pbd03030
DNA replication
pbd03430
Mismatch repair
pbd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PBOR_11600
03430 Mismatch repair
PBOR_11600
03440 Homologous recombination
PBOR_11600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbd03032
]
PBOR_11600
03400 DNA repair and recombination proteins [BR:
pbd03400
]
PBOR_11600
Enzymes [BR:
pbd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PBOR_11600
DNA replication proteins [BR:
pbd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PBOR_11600
DNA repair and recombination proteins [BR:
pbd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PBOR_11600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
DUF6282
Herpeto_peptide
HROB
Motif
Other DBs
NCBI-ProteinID:
AIQ57502
UniProt:
A0A089L9M2
LinkDB
All DBs
Position
2677793..2681518
Genome browser
AA seq
1241 aa
AA seq
DB search
MSPFVHLHVHSEYSLLDGAARITDLVRRAGEYGMKSLALTDHGVMYGAIPFYRACQENGI
KPIIGCEAYLTAGSRRERGSRKDQPIYHLILLVKNEMGYRNLMKLISIGHLEGQHYKPRI
DMEALAAHAEGIICLSACLGGEVPQHLLHGRDEEARKSALRYKEIFGPDFYLELQDHGMP
EQKRVNPKLIQLAAELDIPLVATNDVHYMDKEDAEVQDVLICIGTGKSVDDEDRLKIGTD
QLFFKSGEQMASLFPHVPQALENTLRIAEACNLELTFGNHILPEYSPLPEGLDAAAYLRE
LCRSGLEARYADTPLWASPEQKETAEKRLAYELGVIENMGFSDYFLIVWDFIAFCHRNGI
VTGPGRGSSAGSLTAYTLKITDVDPLKYNLLFERFLNPERITMPDIDIDFSDERRDEVIA
YVVDKYGKEHVAQIITFGTMAARAAVRDVGRALNLPYNEVDKAAKLIPGQLGISITRALE
STPELKALYDANPKTRGLLDMAMKVEGMPRHASTHAAGVIISKGPLTDAVPLQAGSESTA
LTQYSMEHLESVGLLKMDFLGLRTLSIIERCMNWVKEMTGSVPDFRFIPDHDPLTYGMLG
AGETTGVFQLESAGVRRVLKDLKPSGFEDIVSVVALYRPGPMEFIPKFIGGKHGEFEVVY
PHADLKPILADTYGIIVYQEQIMQIASLMAGFSLGEADLLRRAVSKKKRETLDKERSHFV
EGSLKQGYQEADANEVYDMIVRFANYGFPRAHAAAYGVLAFQTAYLKAHYPVQFMAAMLT
AVMGTHRKVAEYVLECRRTGIGVLPPDVNESGVLFTPVPGEGSGHIRFGLAAVKNVGTLA
VENIMAVRKERPFDSLLDFCRRVDLRVCNKRVIESLLQTGAFDRLPGHRAQLLAMLDETV
DAAAKWRKERDELQIQLFDDLIETPNWEIRYPDIPKFSVTQQLELERELLGLYLSGHPLD
DSAALLEEPGMQKLMDLGETADESMIVTAGMVVSLKEITTKAGKAMAFVEWEDQIERCEV
VLFPEVWKRSRGLIEKGALLALRAKVQQEDEGFKLLAEEVAPLTSDSVRGLLQRRSAAGA
RPAYAGRNAPAGAPAAAPAARTGAGSPGARSGGAAGTAAAPGTRTPAAQPPGARANAAAA
QAAPQSPAAPGARPDTAERSASPAQSTQRVFIKITPGAELKGLLPRLQALLQTHPGPAAT
LLFYERNQKVLALSDSYRIEPSEELFAAIESMLGAGTVRIK
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atgagccctttcgtgcatttgcatgtgcacagcgaatacagtttactggacggggcggcg
cgcattacggatctggtgcgccgggccggcgaatacggcatgaaatcgctggcgctgacg
gatcatggagtgatgtacggggccatccctttctatagagcttgccaggagaacggcatc
aagccgatcatcggctgtgaagcttatttgaccgcaggctcgcgccgtgagcggggcagc
cgcaaggatcagccgatctatcacctgattctgctggtgaagaatgagatgggctacaga
aacctgatgaagctgatctccatcggccatctggagggccagcactacaagccgcggatc
gatatggaagcactggcggcgcatgctgaaggcatcatctgcctcagcgcctgtcttggc
ggagaagtgccgcagcatctgctgcatggacgggatgaggaagcccgcaagtcggcattg
cgttataaggagatttttggacctgacttctatctggagctgcaggatcatggtatgcct
gaacagaagcgggtgaatccgaagctgattcagcttgctgccgagctggatattcccctg
gtggctacgaatgacgtccattatatggacaaggaggatgccgaggttcaggatgtgctg
atctgcatcggcaccggcaaatctgtggatgatgaggaccgcctgaagatcggtacggat
cagctgttcttcaaaagcggtgagcagatggcctcgctgtttccgcatgtgccgcaggcg
ctggagaacacgctgaggattgcggaagcctgcaatctggaattgacgttcggcaatcac
attctgccggagtattcccctctgccggaagggctggatgccgctgcatatttacgcgag
ttatgccgcagcgggctggaagcgcgctacgcggatacgccgctatgggcgtcgccggag
cagaaggaaaccgccgagaaacggctggcctatgagctgggcgtgatcgagaacatggga
ttcagcgattacttcctgattgtctgggatttcattgctttctgccaccggaatggtatt
gttaccggtccgggccgtggttcctcggcaggcagtcttacagcgtacacgctgaagatt
accgatgtagatccgctgaaatacaatctgctcttcgagcgattccttaatcctgagcga
attacaatgcccgatattgatattgacttcagtgacgaacgccgcgatgaggttattgcc
tatgtggtggacaaatacggcaaggagcatgtggcgcagatcatcaccttcggaacgatg
gcagcaagagcagctgtacgggatgtaggccgtgcgctgaatctgccgtataacgaagtg
gacaaggcagcgaagctgattccgggccagctcggcatcagcatcacccgggcgcttgag
agcacgcctgagctgaaggcactatatgatgccaatccgaagacccgggggctgctcgat
atggcgatgaaggttgaaggcatgccgcgtcatgcatcaacgcatgctgccggagtaatc
atctctaaggggccgctgaccgatgctgttccgcttcaggcgggcagtgagagtacagcg
ctgacgcagtactccatggagcatctggagagtgtaggcttgctgaagatggacttcctc
gggctgcggaccttgtcgattattgaacgctgcatgaactgggtgaaggagatgaccggc
agtgtccctgatttccgtttcatcccggatcatgatccgctgacttacgggatgctcggg
gcaggcgagaccaccggcgtgttccagctggaatctgcgggtgtacggcgggtgctgaag
gatctgaagcccagcggctttgaagatattgtctcggtggtggctctgtaccgtccgggt
ccaatggaatttattccgaaattcatcgggggcaagcacggggagttcgaggttgtttat
cctcatgctgatctgaagccgattctggctgatacctacgggatcattgtctatcaggaa
cagatcatgcagattgcctccctgatggccggcttctcgctcggcgaagccgatctgctg
cgccgggcggtgtccaagaagaaacgggagacactggataaggaacgcagccactttgtg
gagggcagtctgaagcagggctatcaggaggcggatgccaatgaggtgtatgacatgatc
gtgcggtttgccaactacggcttcccgcgtgcacatgctgccgcctatggcgtgctggcg
ttccagacggcctatctcaaggcgcattatccggtgcagttcatggcagccatgctgacc
gccgtgatgggaacccaccgcaaggtggcggagtatgtactggagtgccgccgcaccggg
attggtgtgctgccgcccgatgttaacgagagcggcgtgctgttcacccctgtacccggc
gaaggcagcgggcatatccgcttcggactggctgcggttaagaatgtcgggacgctggcg
gtggagaatattatggcggtccgcaaggagcgcccgttcgacagcctgctcgatttctgc
cgccgtgtcgatctgcgcgtctgcaacaagcgcgtcattgaatcgctgctgcagacaggc
gccttcgaccggcttcccggccaccgggcccagctgctggcgatgctggatgagacggtt
gatgcggcagcgaaatggcgcaaggagcgcgatgagctgcagatccagctgttcgatgat
ctgatcgagacccccaactgggaaatccgctatccggatatcccgaaattctccgtgacc
cagcagctggagctggagcgtgagctgctgggcctctatctgtccggccatccgctggat
gacagcgcagccctgctggaggagccgggaatgcagaagctgatggatcttggcgaaacg
gcggacgagagcatgattgtgacggccggcatggttgtatcgctcaaggaaattacaaca
aaagccggcaaggcgatggcctttgttgaatgggaagaccagatcgagcgctgcgaggtc
gtactcttcccggaggtgtggaaacgcagccgcggcctgatcgagaagggcgcgctgctg
gccctgcgcgccaaggtgcagcaggaggatgagggcttcaagctgctggccgaggaggtg
gcaccgctcacctcggacagcgtgcgcggcctgctgcagcgccgcagcgccgcaggcgcc
cggcccgcctacgcgggccggaacgcccccgcaggagcgcctgcggcagctcctgcagcc
cgtacgggcgccggaagccccggcgcccgcagcggcggtgcagctggcacagccgctgca
ccgggcacacgcacaccggcggcacagccgcccggtgcgcgcgctaacgcggccgctgcg
caggccgcgccccaatccccggccgcaccgggcgcgcggccggacaccgctgagcgctcc
gcaagcccagcacagagcacccagcgtgtcttcatcaagatcacgccgggtgctgagctc
aagggtctgctgccgcgcctccaggcgctgctgcagacccacccgggaccagctgcgacg
ctgctgttctacgagcgcaaccagaaggtgctggcgctcagcgacagctaccggatcgag
ccctcggaggagctgtttgcggcaatagagagcatgctgggagccggaaccgtcagaatc
aagtag
DBGET
integrated database retrieval system
