KEGG   Paenibacillus borealis: PBOR_11760
Entry
PBOR_11760        CDS       T03324                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
pbd  Paenibacillus borealis
Pathway
pbd03030  DNA replication
pbd03410  Base excision repair
pbd03420  Nucleotide excision repair
pbd03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pbd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PBOR_11760
   03410 Base excision repair
    PBOR_11760
   03420 Nucleotide excision repair
    PBOR_11760
   03440 Homologous recombination
    PBOR_11760
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pbd03032]
    PBOR_11760
   03400 DNA repair and recombination proteins [BR:pbd03400]
    PBOR_11760
Enzymes [BR:pbd01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     PBOR_11760
DNA replication proteins [BR:pbd03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     PBOR_11760
DNA repair and recombination proteins [BR:pbd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     PBOR_11760
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     PBOR_11760
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_polI_exo1 5_3_exonuc HHH_5 HHH_2 AAA_30
Other DBs
NCBI-ProteinID: AIQ57533
UniProt: A0A089LEG1
LinkDB
Position
2720926..2723598
AA seq 890 aa
MDKLILIDGNNIIYRAFFAMPPLTNTAGQQTNAVYGFTTMLLRLIEEHKPSHMIVAFDAG
KITFRHEGYEDYKGGRQKTPPELSEQFPLLKELLQGLGVPQFEIGGYEADDIIGTISREA
DAAGRQVMIVSGDKDMLQLASEHTTVALVRKGVTEVELYGPQQIRDKYDLTPEQIIDLKG
LMGDASDNIPGVPGVGEKTALKLLQQFGSVEGVLAGTGELKGKMKEKLEEHADSAIMSKK
LATIYREVPLAHAWEDMVFSGINTDTAGPALAKLEFKSLLERLSLSAYSHAADGSGSDPA
EVEAAALNITIVDEAGMADLIAALPSISALHVESNGENPHRAEVIGLGLSSPEQHYFVPF
ALLKSTAAAPLRDWLGDDKAPKSGYDLHRADLALHWQGIAFAGAANDVQLAAYLLDPTEA
NQNLNDLTSKYGLPRLSPDEDVFGKGAKYRIPELEILGNHVARKSATVLGIVQKQQEELK
ETAMTGLFQDLEMPLSRILADMEKQGIAVNRDDLIELGKEFEAQISRLVAEIYSICGTEF
NLNSPKQLGEILFVKLGLPVVKKTKTGYSTDAEVLEKLAPYHDAVRLILQYRSIAKLQST
YVEGLLKEISPETGKVHTFYRQTIAATGRLSSQFPNLQNIPIRLEEGRKIRKVFVPSEPG
WSILAADYSQIELRVLAHISGDERMKEAFVENMDIHTKTAMDVFGVTADMVDSNMRRSAK
AVNFGIVYGISDYGLSQNLNIPRKEAAQFIEQYFEVFKGVRRYMDDIVVEARKQGYVTTL
LERRRYLPEINAKNFNLRSFAERTAMNTPIQGTAADIIKLAMVHMDQALYERGLKSRMLL
QVHDELVFEVPEDELEQMKQLLPEVMAGALKLSVPLKAEVSFGSNWYEAK
NT seq 2673 nt   +upstreamnt  +downstreamnt
gtggacaagctgatactgatcgatggaaataatatcatttaccgggcatttttcgcgatg
cctcccctgacgaatacagcaggacagcagacgaatgcagtgtacggtttcacgacaatg
ctgctgcgtttgattgaagagcataagccgagtcatatgattgtggcctttgatgcgggg
aagattaccttccggcatgaagggtatgaagattataaaggcggtcgccaaaagactccg
ccggagctgtccgaacagttcccgctgctgaaggaattgctgcagggattaggggtgccg
cagtttgagatcggcggctatgaagccgacgatattatcggcaccatctcccgcgaggcg
gatgccgccgggcggcaggtgatgattgtgtccggggataaggacatgctgcagctggca
tccgagcatacaaccgtggcgctggtccgcaagggcgttacggaagtagagctgtacggg
ccgcagcagatccgggacaaatatgatcttaccccggagcagatcatcgatctgaaaggg
ctgatgggcgatgccagtgacaatattcccggtgtaccgggtgtaggagagaagacggcg
cttaagctgctccagcagttcggatcggtggaaggcgtactggccggaaccggtgagctg
aagggtaaaatgaaagaaaagctggaggagcatgctgacagcgccattatgagcaagaag
ctggcgacgatctaccgcgaagtgccgcttgcgcatgcctgggaggatatggtcttcagc
ggaatcaatacggatacggctggccctgcactggccaagctggaattcaaatccctgctc
gaacgtctgtcgctcagcgcttattcgcatgcagctgacggcagcggttcagatcctgca
gaagtggaagcagcggcgctcaatataactattgttgacgaagcaggaatggcggacctg
attgctgcgttgccgagtatctccgcgctgcatgtggagtcgaacggtgagaatccgcac
cgtgcggaggtcattggcctcgggctgtcttcaccggagcagcactacttcgtgccgttt
gccctgctgaagagcaccgcagcggcacccctgcgggactggctcggcgacgacaaggcg
ccgaagagcgggtatgacctgcaccgtgccgatctggcgctgcattggcaggggattgct
tttgccggagccgctaatgatgtccagcttgcagcttatctgcttgacccgacggaagcg
aaccagaacttgaatgatctcacaagtaaatacgggctgccccgtttatcgccggatgaa
gatgtatttggcaaaggggccaaatatagaataccggagcttgaaatactcggaaatcat
gtcgcccgcaagagcgcaactgtgcttggcatcgtgcagaagcagcaggaggaactgaag
gagacggcaatgaccggactgttccaggatctcgaaatgccgttgtcgaggattcttgcc
gatatggagaagcagggcattgcggtcaaccgggatgaccttattgagcttggcaaggag
tttgaagcgcaaatctccaggctcgttgcggaaatctactcgatttgcggaacagagttc
aatctcaattcaccgaagcagctgggggaaatcctgttcgtgaagctcggcctgcctgtc
gtgaagaagacgaagaccgggtattctaccgatgccgaggtgctggagaagctggctcca
taccatgacgccgtgcgtctgatcctgcaataccgctccattgccaagctgcagtccacc
tatgtggaaggcctgctgaaggaaatctcgccggagaccggcaaggttcataccttctac
cggcagacgattgccgcaacgggccgcctcagcagccagttcccgaacctgcagaatatt
ccgatccggctggaagaaggccgcaagatccgtaaggtgttcgtgccttccgaaccgggc
tggtcgattctggcggcggattactcgcagatcgagctgcgtgtactggcgcatatctcc
ggtgatgagcggatgaaggaagcttttgtagagaatatggatattcacaccaagacggcg
atggatgtattcggcgttacagccgatatggtagacagcaatatgcgccgttccgccaag
gcggttaacttcggaattgtgtatggcatcagtgattatggtctgtcacagaacctgaac
attccgcgcaaggaagcagcccagttcattgagcagtatttcgaagtgttcaaaggcgtc
cgccgctatatggatgacattgtcgtagaggcccgcaagcaggggtatgtgaccaccttg
ctggagcgccggcgctatctgccggagattaatgcgaagaacttcaacctgcgttccttc
gccgagcgtacagccatgaatacgccgatccagggaacagccgccgatattatcaagctg
gcgatggttcacatggatcaggcgctgtacgagcgcggactgaagagccgcatgctgctg
caggtgcacgatgagcttgtgttcgaggtgccggaagatgaactggagcagatgaagcaa
ttgctgccggaagtgatggccggggcactgaagctgtctgttccactgaaggccgaggta
agttttggcagtaactggtatgaagcgaaatag

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