KEGG   Paenibacillus borealis: PBOR_15950
Entry
PBOR_15950        CDS       T03324                                 
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
pbd  Paenibacillus borealis
Pathway
pbd02024  Quorum sensing
pbd03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pbd00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PBOR_15950
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    PBOR_15950
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pbd03019]
    PBOR_15950
   03036 Chromosome and associated proteins [BR:pbd03036]
    PBOR_15950
Messenger RNA biogenesis [BR:pbd03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     PBOR_15950
Chromosome and associated proteins [BR:pbd03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    PBOR_15950
SSDB
Motif
Pfam: Hfq Hfq_1 Flag1_repress
Other DBs
NCBI-ProteinID: AIQ58259
UniProt: A0A089MP22
LinkDB
Position
complement(3666459..3666680)
AA seq 73 aa
MESLKLQERLLNQCISTKVPVTIFTTNGVKMQGLVTSYDAYTITLQGQGDGRQNVLFKSA
VSTVVPLKPVSLK
NT seq 222 nt   +upstreamnt  +downstreamnt
gtggaaagtctaaaattacaggaacgtttgttgaaccagtgtatctcaacaaaagtgccc
gtgacgatttttacaactaacggagtcaaaatgcagggacttgtaacctcttatgacgct
tatacaatcaccttgcagggtcaaggtgacggcagacagaacgtgctcttcaaatcggca
gtctcaacggtagtgccgctgaagcccgtctcgctcaaataa

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