Paenibacillus borealis: PBOR_15950
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Entry
PBOR_15950 CDS
T03324
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
pbd
Paenibacillus borealis
Pathway
pbd02024
Quorum sensing
pbd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pbd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PBOR_15950
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PBOR_15950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbd03019
]
PBOR_15950
03036 Chromosome and associated proteins [BR:
pbd03036
]
PBOR_15950
Messenger RNA biogenesis [BR:
pbd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
PBOR_15950
Chromosome and associated proteins [BR:
pbd03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
PBOR_15950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
Hfq_1
Flag1_repress
Motif
Other DBs
NCBI-ProteinID:
AIQ58259
UniProt:
A0A089MP22
LinkDB
All DBs
Position
complement(3666459..3666680)
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AA seq
73 aa
AA seq
DB search
MESLKLQERLLNQCISTKVPVTIFTTNGVKMQGLVTSYDAYTITLQGQGDGRQNVLFKSA
VSTVVPLKPVSLK
NT seq
222 nt
NT seq
+upstream
nt +downstream
nt
gtggaaagtctaaaattacaggaacgtttgttgaaccagtgtatctcaacaaaagtgccc
gtgacgatttttacaactaacggagtcaaaatgcagggacttgtaacctcttatgacgct
tatacaatcaccttgcagggtcaaggtgacggcagacagaacgtgctcttcaaatcggca
gtctcaacggtagtgccgctgaagcccgtctcgctcaaataa
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