Paenibacillus borealis: PBOR_15970
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Entry
PBOR_15970 CDS
T03324
Name
(GenBank) helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pbd
Paenibacillus borealis
Pathway
pbd03420
Nucleotide excision repair
pbd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pbd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PBOR_15970
03430 Mismatch repair
PBOR_15970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbd03400
]
PBOR_15970
Enzymes [BR:
pbd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PBOR_15970
DNA repair and recombination proteins [BR:
pbd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PBOR_15970
MMR (mismatch excision repair)
Other MMR factors
PBOR_15970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C_2
AAA_19
UvrD_C
PhoH
AAA_30
AAA_16
SLFN-g3_helicase
DEAD
nSTAND3
NACHT
Motif
Other DBs
NCBI-ProteinID:
AIQ58263
UniProt:
A0A089LGI6
LinkDB
All DBs
Position
3669507..3671864
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AA seq
785 aa
AA seq
DB search
MDKHDHEWQEEQERVTGITRQLSTHIRLLSEELGLHRTDVVDMRKDFWEEVTVNFSSPDD
LGETSTSLRQQAQILNERERHHLQSSKALKKYKKLVVSPYFGRIDFSESADTAAEKIYLG
IGSLMEDNGTFLIYDWRAPISSLYYDGAPGPAAYDTPGGLITGNMELKRQFVIDNGEIEV
MFDTGVTIGDELLQQVLSHSADDRMKSIVATIQKEQNAVIRNDRSRMLVVQGAAGSGKTS
AALQRVAYLLYKYREVLQADQMLLFSPNPLFNSYVSTVLPELGEENMQQTTFQMYLEHRL
GQEFQLEDVFNQTESLLNAPDGPEASIRRAGITYKSSVSFLDVIRRYVNLLEHEGMMFKP
LMFQGRAVVGKEEMERQFYSYDPGIKLANRIELMTGWLLKRIAAFSIEERTASWVEDQIE
LMDNSDYQRAYNMMRRKGGGHNESFDDFDTEKIMLARYIVSQRLKPLRGWTKRGRFVDVK
GLYSRLFTDRELMDSLNSSRDLPEEWDDICDFTLATIAGNELAYEDATPFLYLKELSQGF
RTNTLIRHVIVDEVQDYSPFQLEFMRRLFPRAKMTVLGDLNQAIYAQGEVLGDLAGLVSI
YGAENTEVISLTRSYRSTYEIVEFTRAMIPGGEKIVPFNRRGEEPLLTVVDSEADLLASV
EQDVLNLHAQGYHYVAVICKTAEESARVHSELQSRLPVRLVTKETPNFQKGTLVLPAYLA
KGVEFDAVIIYDGSAEKYGREHERKLFYTACTRAMHLLHIYSLGQPNPFLPAAVRETVSA
GSLQD
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
ttggataaacatgatcacgagtggcaagaagaacaggagcgggtaaccggaattaccaga
caattatctacccacatccggctgctgtcggaggagctgggactccaccgcacggatgtc
gtggatatgcgtaaagacttctgggaggaagttacggtgaacttcagcagccccgatgat
ctgggcgagacctctaccagcctgcggcagcaggcgcagatcctgaacgaacgcgagcgc
catcatctgcaatccagtaaagcactcaaaaaatataaaaagctggtcgtatccccctac
ttcggccggatagatttctcggaatctgcggatacggcggcagaaaaaatctacctgggc
atcggttcactgatggaggataacgggaccttcctgatctacgactggcgggccccgata
tcgagcctgtattacgacggtgcgccgggcccggcggcctatgacacaccaggcggttta
attacggggaacatggagctcaaacgccagtttgtaatcgataatggagagatcgaagtc
atgttcgataccggcgtaacgatcggcgatgagctgctgcagcaggtgctaagccacagc
gccgatgaccgcatgaagagtatcgttgcgaccatccagaaggaacagaatgcggtaatc
cgcaacgacagaagccggatgctggttgtgcagggagcggccgggagcggcaagacttca
gcggcgctccagcgtgtagcttacctgctctacaaataccgcgaggtgctgcaggcggac
cagatgctgctcttttcaccgaacccgctgtttaacagctatgtatcaaccgttctgcct
gaactcggtgaagagaatatgcagcagaccaccttccagatgtatctggagcaccggctc
ggacaggagtttcagctggaggatgtgttcaatcaaacagagagcctgctgaacgcgccg
gatggaccggaagcctccatacgaagagcaggaattacctataaatcctccgtatctttc
ctggatgtcatccggcggtatgtaaacctgctggaacatgaaggaatgatgtttaagccg
ttgatgttccagggtcgtgcggttgtgggcaaagaagagatggagcgccagttctacagc
tatgatccgggtatcaagctggctaaccggatcgagctgatgacgggctggctgctcaaa
agaatagctgcgttcagcattgaggaacgtactgcatcatgggttgaagaccagattgag
cttatggataacagcgattatcagcgtgcttacaatatgatgcgccgcaagggtggaggg
cataatgagagttttgatgactttgatacggagaaaatcatgctcgcccgttatatcgtc
agccagcggcttaagccgctgcgcgggtggaccaaacgcgggcggttcgtcgatgtaaag
gggctgtacagcagactgtttacggaccgggagttaatggacagcttgaacagcagccgg
gatctgcctgaggaatgggatgacatctgcgatttcacgctggccaccattgccgggaat
gagctggcctatgaagatgcgactccgttcttgtatttgaaggagctcagtcagggtttc
cggacgaatacgctgatccggcatgtcattgtcgatgaagtccaggactattccccgttc
cagctggagttcatgcgccggttgttcccaagggccaaaatgacggtgctcggcgatctc
aaccaggcgatctacgcccaaggtgaggtgctgggagatttggcaggattggtcagcatc
tatggtgcagagaacacggaggtaatctcattaacccgcagctaccgctctacctatgag
attgtcgagtttactcgggcaatgatccccggaggggagaagatcgtaccctttaaccgg
cgcggcgaggagcctctgctgacggtggtggacagtgaagccgacttgctggcttcggtg
gagcaggatgtgctgaatctgcacgcacagggctatcactatgtagcggttatctgcaaa
acagcggaagaaagtgcacgggtgcatagcgaactgcagagcagactgccggtaaggctg
gttacgaaggagacgcctaatttccagaagggtacgttggtgttgcctgcatatctggcc
aaaggcgtggagttcgacgcggtaattatctacgatggctcggcagagaaatatggccgt
gagcatgaacgtaagcttttctataccgcttgtacccgggcgatgcatctgcttcatatc
tacagcctgggacagcctaatccgttccttccggctgcggtgcgtgagactgtatcggca
gggtctttgcaggactaa
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integrated database retrieval system
