Paenibacillus borealis: PBOR_18420
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Entry
PBOR_18420 CDS
T03324
Name
(GenBank) hypothetical protein
KO
K20276
large repetitive protein
Organism
pbd
Paenibacillus borealis
Pathway
pbd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pbd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PBOR_18420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGL11_C
RGI_lyase
Lipase_GDSL_2
Lipase_GDSL
AGA-YXIM_GBD
ChitinaseA_N
FG-GAP_3
FG-GAP
Big_13
FIVAR
Motif
Other DBs
NCBI-ProteinID:
AIQ58695
UniProt:
A0A089LF16
LinkDB
All DBs
Position
4186742..4193140
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AA seq
2132 aa
AA seq
DB search
MRRKMAFFKKSMFAFLLSLMLVIPLAIPPSPVHAESTGSLPARQAEYLNRGLVAVLVDNG
VYLSWRYLNTDSNDIAFNVYKNGYKVNSAPISDSTNYVDATGADSSQYQISTVIAGKEEM
QAETVSVLHNGYLPIPLDKPADGRTKDGGTYSYYAGDASVGDLDGDGDYEIVFLWSPSNS
KDNSQAGYTGNVYIDAIEMDGTKLWRIDLGVNIRAGAHYTQLMVYDLDGNGKAEVVVKTA
DGTKDGQGTVIGDGTKDYRNESGYILSGAEYLTLFDGQTGAAVSTVNYDPPRGDVSAWGD
GYGNRVDRFLAGIAYLDGVKPSVVMARGYYTRTTLTAYDYVGGQLVKRWNFDTNEAGSQY
EGQGNHNLSVLDVDSDGKDEIMYGSLAIDDDGTLIYSTGLGHGDAMHAGKLDPNREGYQI
VSVHEHTNAEYGLEMRDAGTGEIIWGQYTGKDTGRGMSADIDPNYPGYESWASTIVDGQM
DPLSRGYSADGEVIYEQNEVPRSANFAVWWDGDLQRELFDHEWNNTTAKGIPLVYKWDYE
NKQLKEIFRATGTLTNNHTKGNPALQADILGDWREELLLRSEDSSEYRLYTTTIPTSYKI
PALMQDPVYRLGIAWQNVAYNQPPHTGFYLGTEATEFPKANVTLTGAQETTEQVHHFAFG
TDPAAGTTAIQDTLYTQATGYGFESTSGITMDANHVSLPDNAKFAVDLPNANYKVTLKLG
ADARDSNMGVKSEFVQKLAVTGISAGAPLVYSYDVALVDGQLEFNFSGTAIDVQEIIIGK
YPEKTPGTAKTIYMAGDSTMQSYSSAQAPQEGWGQQFGRYFANGVVVQNDSIGGRSSKSF
MVDGRLDTILQRIKPGDYFFISFGHNDASIGIPDRYASPADYKTYLTRYVNGAKQRGATP
VLLTPVGRRDFNTVTQEFNVSFPEYVKAAKEVAAELNVPLIDLSQLSIADYNRVGLAATE
KIFLYANPGEYPKYPNGVGDNTHFSSYGAQVIAGLVAGAVKEMGLTISPLVIDPDISEPE
PEPEAQVYEENFEGDPAAAQYSMVNATGIAGTMTGTVTEQSGNKVMSVTGSGSGNRAKVF
RLFDAVNGDIVNVNFNWHSGNVGATPSEGHLTLQDSNENTIFTLLTKTGTASPNTKIHYF
VGPYTPDYGTGTTAVPEGGIATDILKNQWVNANVKINFAEKKIDLTLTSLADPSITQTIK
DIPMSSGVYANNVRGFRFLGTRKGGGGTLSWTTQIDNVKLEGTKLPPVAGDQTALIALHH
EVKALDLSAYSDASIAVLNKALTSVEAVMATAAATQAQVDHAVNVLTVARDSLTREPAGD
ISEYKFDFGSGTAAQGYTKVDSKRAYIEGNGYGFTDTTLVEDENRETGNALTEDFIRMNG
SSLLVEMKPANYRVTMTIGDALEATNAAVVVEQMTKVPVTTVAKGQFTEVSYDIALIDGV
FDFTFSGNTPKINALKIERLPEIGVADQPTLYLASDSTVANYAESYRPQAGWGETLGGYF
DLDQIRIDNRAVSGLSSKTFLVGGYLNDILLGIHEGDYLFMQWSHNDSTPSRPERYLTPE
QFKVYLKDYINGTVQRGAIPVLVTPVNRRDFTGEVLNKSFPEYVQAMKETAQETGALLID
LNQVSWEYFQELGPEGTKSIFMWVGTTEDNTHLQMNGAVKVSGMVAKLVQKLNIPLSALV
TIEGEPSDETAPHTSAAVEGSSQNGWYTSAVEVTFTATDEDSGVDATYYQVDSGEIQTGT
KLTLSDEGKHTVTYWSVDLDGNKETEQTLKVPVDLAPPAIEIQGQPEYTIDQQIEITYTA
FDTVSGVAEPSGVLLNAPAYTLEPGLHEVTATVSDLAGRETSVDFSFGVTATFASLAELT
RAFAAESEDPGAGALAEQLGGKLQQAEQAAGAHEGAKARQLLAAYGNDVNAGRNTVFTAE
QADVLSTWAAWISQGTPLANSAPGTPVLSDNNGHDTGLRDGDYTITMNLWWGNNGTKFKL
YENGELIKEVSLADQSPSAQSVQIDIAGKRNGTYIYTGELTNSLGTTKSTPLSVTVTDAS
PGQAVLSNDNWDGDGSYNVSMNLWWGTNATGYELYENGVLVDSQALQAHTPGAQSAVTAI
SGKTPGTYEYEVVLRNPAGETRTPKMIVTVRK
NT seq
6399 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagaaaaatggctttcttcaaaaaatcaatgttcgcattcttattatcattaatg
ctggttatcccgcttgccattccgccatccccggtacatgctgaatcaaccggcagtctt
ccggcccgtcaggcagagtatctgaaccgcggattagttgcggtcctcgttgataatggt
gtttatttgagctggcggtacttgaacacggattcaaatgatatcgctttcaacgtatac
aagaatggctataaggttaattcggccccaatcagcgactccaccaattatgtggatgcg
acaggtgcagacagttcccagtatcagatatctaccgtaatagccggtaaggaagaaatg
caggcggagacagtatcggtgctgcataacgggtatttgcccatcccgctcgataagccg
gctgacggccggaccaaagacggaggcacatactcctattatgcaggagatgcttctgta
ggagatttggatggcgacggcgattatgaaatcgttttcttatggagtccgagtaattcc
aaggacaattcgcaagccggttataccggcaacgtctatatcgatgccattgaaatggac
ggtacgaagttatggcgaatcgacttgggtgtcaacatccgcgccggagcccattataca
caactgatggtgtacgatctggacggcaacggcaaagctgaagttgttgtcaaaacagca
gacggcacgaaggacggccaaggcacagtcatcggcgacggcacgaaggattaccgcaat
gagagcggatacatcctctctggagcagaatatctgacgctatttgacggtcagaccgga
gcagcagtatccaccgtgaattacgaccctccaagaggggatgtgagcgcctggggggat
ggatacggcaaccgtgtagaccgattcctggcggggattgcctatctggatggcgtgaag
ccaagcgtagtgatggcccgcggctactacacacgaacgacgctcacagcttacgactat
gttggcggtcaactggtgaagcgctggaacttcgataccaatgaagccggatcacaatat
gaaggacaaggaaatcacaatctaagcgtgcttgatgttgacagtgacggtaaagacgaa
atcatgtatgggtcccttgcgattgacgatgatggaaccctgatctatagcaccggactc
ggccatggagatgccatgcatgccggcaagcttgatcctaaccgggaaggttaccagatc
gtcagcgtgcatgaacacacgaatgccgaatacgggctggagatgcgcgatgccggaacg
ggagagattatctggggccagtataccggcaaggataccggacgcggtatgtcagcggat
attgatccgaactatccgggatatgaatcctgggcatctacgattgtcgatggtcagatg
gaccctttatcccgcggatactcggctgacggagaagtcatttatgaacagaatgaagtg
ccgcgaagcgccaactttgcggtctggtgggacggcgatcttcagcgggagctgttcgac
cacgaatggaataacactacagcgaaaggcattccgctcgtttataagtgggattatgag
aataagcagctgaaggagattttccgggcaaccggcactttgactaataaccacaccaaa
ggcaatcctgcccttcaggcggatatcctgggcgactggcgcgaggagctgctgctgcgc
agcgaagacagctcggagtacagactctatacaacaactattcctacaagctacaagatt
cccgcgctgatgcaggatccggtataccgtttgggtatagcctggcagaatgtcgcctac
aaccagccgccgcacaccggattctatctcgggacggaagcaacggaattccctaaggcg
aacgtaactcttacaggagcacaagaaacaactgagcaggtccatcactttgctttcggt
acggacccggcagccggaacaacagctattcaggatacactatatacacaagcaaccggg
tacggttttgagagtacaagcggaattacaatggacgcaaatcatgtttcgcttccggac
aatgcgaaatttgcagttgacctgcccaatgccaattacaaggtaacgctcaagcttggt
gctgatgcccgggacagcaatatgggtgtcaaatctgaatttgtccaaaagctggctgta
acgggcattagcgcaggtgcgccgctggtttattcctacgacgtggcgctggtcgacggt
cagctggagttcaacttctccggcacggccattgatgtgcaggaaattatcatcgggaag
tacccggagaagacgccgggaactgcgaagacaatctatatggccggtgattccaccatg
cagtcttatagcagtgcgcaggctccgcaggaaggttggggccagcaattcggacgatat
ttcgcgaatggcgtggtggtccagaacgattcgatcggcggcagaagcagcaaatcgttc
atggttgacggccgtctggatacgatattgcagcggatcaaaccgggggattacttcttc
atctccttcggccataacgatgccagtataggaattccggaccgttatgcatctcctgca
gattataaaacctatctgacccgttatgtgaacggagccaagcagcgcggtgcaacacct
gtactgcttacgccggtagggcgcagagactttaacacggttactcaggaatttaacgta
agcttccccgaatacgtaaaggcagccaaggaagtggcggcagagctgaacgtgccgctg
atcgatttaagccagttaagcattgcggattacaatcgtgtcggtctggcggcaacggag
aaaatcttcctgtacgctaatcccggtgaatatccgaagtacccgaacggcgtcggcgat
aatacgcatttcagcagctacggtgcgcaggttattgccggtctggtagcaggagcggtg
aaagagatgggattaaccatatcaccgttagtgatcgatccggatatttcagaaccggag
ccagagccggaagctcaggtgtatgaagagaatttcgagggagatccggctgccgcacaa
tattcgatggtgaacgccacgggtatagccgggacaatgacgggcacagtcaccgagcaa
agcggaaacaaggtgatgtcagttaccggttccggctccgggaatcgcgcgaaagtgttc
cggttgttcgatgcggtgaacggcgacatcgtcaatgtcaatttcaactggcattccggt
aatgtaggcgcaaccccgtcagaaggacatctgaccctgcaggattcgaatgagaatacc
attttcacgctattaacaaagacgggaaccgctagtcccaacacgaaaatccattatttt
gtaggcccgtatacacctgactatggaaccggcaccacagctgttccggaaggcggaata
gctacggacatcctgaagaaccagtgggtcaatgccaatgtgaagattaacttcgctgag
aagaagattgatttgacgctgacgagtctggctgacccaagtatcacccagacgatcaag
gatattccgatgagctccggcgtttatgccaataacgtaaggggattccggttcctggga
acgagaaagggaggaggcggcaccctgagctggaccacccagatcgacaatgtgaagctc
gaaggcacgaagcttccaccggttgcaggcgatcagacagcattaattgcgctgcatcat
gaagtgaaagccttggatctgtcagcctattcggatgcatccatagccgtactgaataaa
gctttgacgtctgtggaggcggttatggctacagctgctgctacacaagcccaagtcgac
catgcagttaatgtgctgacggtcgcgagggattcgctgacccgcgaaccggcaggtgac
atcagcgagtacaaatttgatttcggctccggcaccgctgctcaaggatacaccaaagta
gattccaagagagcatatatcgaagggaatggctatggctttacggacaccacgctggta
gaggatgagaaccgtgaaaccggaaatgcgctgacagaggatttcatccgcatgaacggc
agcagcctcctggtggagatgaagccagccaattaccgtgtaactatgaccattggtgat
gcactggaagcgaccaatgctgctgtagttgtagaacaaatgaccaaagttccggttaca
accgtcgccaaaggccagttcaccgaagtgtcttatgacattgccctgattgacggtgtc
tttgactttacgttctccggcaatacaccgaagatcaatgcgcttaagatcgagcgcctg
ccggagattggcgtagctgaccagccaaccctgtatctggcaagcgattctacggtagcc
aattacgcagaaagctatcgcccgcaggccggatggggcgagacactgggcggttatttc
gatctggatcagattcgaattgataaccgtgcagtcagcggtttaagcagcaaaaccttc
ctggttggcggatatcttaatgacatcctgctgggcattcatgaaggggattatctgttc
atgcagtggtcgcataatgattccacaccgtcccggccggaacgttatcttacaccggag
cagttcaaggtgtatctgaaagattacattaacggcactgtgcagagaggcgcaattccg
gtgctggtcacgccggtgaaccggcgcgatttcaccggagaagtattgaacaagagcttc
ccggaatatgtgcaggcgatgaaagaaacggcacaggaaactggagccctgctgatcgat
ctgaatcaagtcagctgggaatatttccaggagcttgggccggaaggcaccaaatccata
tttatgtgggtaggtacaactgaggacaatacacatctccagatgaacggtgcggttaag
gtatccggaatggttgctaagcttgtacagaagctgaatattccgctctctgccttagtt
acaattgaaggtgagccttcggatgagaccgcgccgcatacaagcgcggcagtggaagga
tcatcacagaacgggtggtatacttcagcggttgaagtaacgtttaccgcaacggatgaa
gattccggcgttgatgcaacctactaccaagtcgacagcggtgagattcagaccggtacg
aagctgacgttaagtgatgagggcaagcacactgtgacttactggagtgttgacctggac
ggcaataaggagacagaacagacgcttaaggtgccggttgacctcgcacctccggccatc
gaaattcaggggcagccggaatacacgattgaccagcagatagagattacctacacagca
tttgatacggtgtccggcgtagcggagccaagcggagtgctgctgaatgctccagcttat
acgctggagcccggactgcatgaagtaaccgctacggtctccgacttagcaggcagggaa
actagcgtagacttcagcttcggtgtcaccgctacctttgcaagtctggctgaactgaca
cgtgccttcgcagcagaatcagaagatcccggcgcaggggcacttgccgaacagctgggc
ggcaagctgcaacaggcagaacaagcagcgggtgcgcatgaaggtgcgaaggcacgccag
ctgctcgcagcctatggcaatgatgtcaatgccggcaggaatacggtatttacagcggaa
caggcagatgtgctgagtacgtgggcagcatggatcagccaaggcacaccacttgcgaac
agtgcccccggcactcctgtattgtccgacaataacggacatgatacagggctgagagac
ggagattacaccatcacaatgaatctctggtggggcaataacggcaccaaatttaagctg
tatgagaacggtgagttgatcaaagaagtgtctctggcagaccagtcaccgtccgcccag
tccgtacagatcgacattgccggcaagcggaatggtacctatatctataccggtgaactg
actaattcactcggtacaacgaaaagcacaccgctgagtgtgactgttacagatgcctct
cctggccaagcggtattatctaacgacaactgggacggagacggcagctataatgtaagt
atgaatctgtggtggggaacgaatgctaccggatatgagctctatgagaatggagtgctg
gtagattcccaagccttgcaggcacatacaccaggtgcacaatcggcagtcactgcaatc
tccgggaaaacgcctggaacctatgaatatgaggttgtgttacgcaacccggcgggagaa
accagaacgccgaagatgattgtcacagtgcggaagtag
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integrated database retrieval system
